Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10023376 |
Family | AA7 |
Protein Properties | Length: 296 Molecular Weight: 34228.2 Isoelectric Point: 9.4049 |
Chromosome | Chromosome/Scaffold: 98 Start: 774850 End: 775857 |
Description | FAD-binding Berberine family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 2 | 283 | 9.3e-23 |
GEDLFWVIRGGGGNTFGIVVAWKLSLVTVPPTGTLFSIKRNQNPTKLFDRWQYVGDKFSGDLIIMHKPIEQLHPNNIRFIVPTKSQHSAFPDGTELPRTR DLRNRFQLDTPLEVLLDRNITISKIGRFKAKSDYVQTPIPEPDLEKIFLKLYEVEDDAIPLEIMPHGGRMREIGESSIPYPHRAGNIYKIQYYMYWYEAG EEAAERNIGWVRKFYEFMEPYVSKNPRSAYVNSRDLGLGVNGNGYEKARKWGVKYFKSNFVKLVRVKTAVDPEDFFRNEQSI |
Full Sequence |
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Protein Sequence Length: 296 Download |
MGEDLFWVIR GGGGNTFGIV VAWKLSLVTV PPTGTLFSIK RNQNPTKLFD RWQYVGDKFS 60 GDLIIMHKPI EQLHPNNIRF IVPTKSQHSA FPDGTELPRT RDLRNRFQLD TPLEVLLDRN 120 ITISKIGRFK AKSDYVQTPI PEPDLEKIFL KLYEVEDDAI PLEIMPHGGR MREIGESSIP 180 YPHRAGNIYK IQYYMYWYEA GEEAAERNIG WVRKFYEFME PYVSKNPRSA YVNSRDLGLG 240 VNGNGYEKAR KWGVKYFKSN FVKLVRVKTA VDPEDFFRNE QSIPPFPNRM EVVDQ* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0277 | GlcD | 0.0001 | 2 | 286 | 308 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam08031 | BBE | 7.0e-14 | 230 | 284 | 55 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. |
Gene Ontology | |
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GO Term | Description |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330608.1 | 0 | 1 | 288 | 221 | 535 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330609.1 | 0 | 1 | 288 | 218 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330611.1 | 0 | 1 | 286 | 190 | 500 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332196.1 | 0 | 1 | 288 | 210 | 526 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523149.1 | 0 | 1 | 288 | 155 | 468 | Reticuline oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vte_A | 0 | 1 | 287 | 195 | 514 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 4dns_B | 0 | 1 | 286 | 198 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 4dns_A | 0 | 1 | 286 | 198 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3tsj_B | 0 | 1 | 286 | 196 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3tsj_A | 0 | 1 | 286 | 196 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DC894588 | 327 | 1 | 292 | 0 |
HO777438 | 318 | 1 | 284 | 0 |
DT505228 | 299 | 17 | 289 | 0 |
FC896393 | 310 | 1 | 284 | 0 |
CX303093 | 185 | 113 | 294 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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