Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10023560 |
Family | CE8 |
Protein Properties | Length: 354 Molecular Weight: 38770.2 Isoelectric Point: 9.3178 |
Chromosome | Chromosome/Scaffold: 1216 Start: 800898 End: 802234 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 46 | 322 | 0 |
SAAGRGDFETIQEAIDSVPSNNSELVFIWVKPGVYVEKVIVPKDKPFITLGGTKPAANDTVVTWHEKGDIFESATLSVLAPYFVARYLTIQNTFGRGGKA VALRVSGDRAAFFDCKMLSYQDTLLDDTGSHYYRNCYIEGATDFICGDASSLFEASDISLLVTSLFHSNGSITAQDRGSESDRTGYVFLRCKVTGVGATL LGRAWGSYSRVVYAYSYLTSAVLPIGWSDWGDKSKQRTVFYGEHKNYGPGANRSKRVAWSKKLAIDEVSPFLSKEMI |
Full Sequence |
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Protein Sequence Length: 354 Download |
MMIHRLATTI ILALLLLQFQ TTLASDASPT PPKDWSVANL IRVDNSAAGR GDFETIQEAI 60 DSVPSNNSEL VFIWVKPGVY VEKVIVPKDK PFITLGGTKP AANDTVVTWH EKGDIFESAT 120 LSVLAPYFVA RYLTIQNTFG RGGKAVALRV SGDRAAFFDC KMLSYQDTLL DDTGSHYYRN 180 CYIEGATDFI CGDASSLFEA SDISLLVTSL FHSNGSITAQ DRGSESDRTG YVFLRCKVTG 240 VGATLLGRAW GSYSRVVYAY SYLTSAVLPI GWSDWGDKSK QRTVFYGEHK NYGPGANRSK 300 RVAWSKKLAI DEVSPFLSKE MIGGKSWIRA KPKFFRIGSK VFKAGTHGTP SMT* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 6.0e-85 | 46 | 328 | 300 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 1.0e-94 | 34 | 329 | 311 | + pectinesterase | ||
PLN02665 | PLN02665 | 8.0e-101 | 38 | 334 | 307 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 6.0e-108 | 49 | 329 | 297 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-161 | 30 | 329 | 300 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 2 | 341 | 10 | 338 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 2 | 348 | 28 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 36 | 348 | 2 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 15 | 336 | 1 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 34 | 336 | 37 | 331 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 46 | 338 | 12 | 318 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 9.94922e-44 | 49 | 330 | 11 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000000009 | 46 | 308 | 36 | 349 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.0000000000001 | 53 | 203 | 18 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.0000000000001 | 53 | 203 | 18 | 190 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |