Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10023604 |
Family | GH3 |
Protein Properties | Length: 656 Molecular Weight: 72473.2 Isoelectric Point: 7.9023 |
Chromosome | Chromosome/Scaffold: 505 Start: 98946 End: 101667 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 124 | 359 | 0 |
LSTPLAIPVLFGGDSVHGNNYAYNATIFPHNIGLGVTRDPDLVKRIGAATAIETRATGVRYVFSPSLAVCRDPRWGRCYESYSEDPDIVRQMTDIITGLQ GDIPPTSSHGVPFVARDKTKVAACAKQFVGAGGTANGIDKNDTVIPWNDLVKIHMLPYLDAIYKGVATIMLSYSSWNGRRMHTNRDLVTSFLKEKLHFRG IVISDWLGIDRITTPEHANYSYSIESALRAGIDMVM |
Full Sequence |
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Protein Sequence Length: 656 Download |
MASSSLYAIV IFLIIIINGS SDEQTTPMTG QADGYIKYKD PRQPMKARIK DLMARMSLAE 60 KIGQMVQIDR SVTTEDVMRK YFIGSVIIVD NSVPDLKSND KEPHNNITVA RWVYTINKIQ 120 NAALSTPLAI PVLFGGDSVH GNNYAYNATI FPHNIGLGVT RDPDLVKRIG AATAIETRAT 180 GVRYVFSPSL AVCRDPRWGR CYESYSEDPD IVRQMTDIIT GLQGDIPPTS SHGVPFVARD 240 KTKVAACAKQ FVGAGGTANG IDKNDTVIPW NDLVKIHMLP YLDAIYKGVA TIMLSYSSWN 300 GRRMHTNRDL VTSFLKEKLH FRGIVISDWL GIDRITTPEH ANYSYSIESA LRAGIDMVMI 360 PYGFREFIRD VTFQVEKNII PISRIDDAVY RILRVKFAMG LFESPLSDLT MAKELGKKEH 420 RELAREAVRK SLVLLKNVKS NDHQPLIPLP KNAKQILVAG SHAHNLGLQC GGWTIDWQGR 480 SGNNLTSGTT ILEGVTNAVD PSTEVVYKEN PSVKFVKSND FSYAIVVVGE QPYAEKYGDS 540 MNLTIPNDGL TTIENVCGVV RCVVILITGR PLVIQPYLAK IDALVAAWLP GTEGQGVSDV 600 LFGDYGFTGK LAMTWFKSVD QLPMNVGDAH YDPLFPFGFG LTTQPNHTSN YNHTM* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-35 | 116 | 642 | 597 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-49 | 432 | 642 | 231 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-69 | 41 | 642 | 685 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 2.0e-76 | 57 | 395 | 343 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 6.0e-80 | 56 | 501 | 456 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 35 | 647 | 25 | 626 | beta-D-glucosidase [Gossypium hirsutum] |
EMBL | CAA07070.1 | 0 | 35 | 651 | 26 | 631 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | XP_002266470.1 | 0 | 35 | 645 | 25 | 624 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313632.1 | 0 | 28 | 645 | 19 | 624 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 35 | 645 | 29 | 629 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 35 | 651 | 2 | 605 | A Chain A, Peanut Peroxidase |
PDB | 1iex_A | 0 | 35 | 651 | 2 | 605 | A Chain A, Peanut Peroxidase |
PDB | 1iew_A | 0 | 35 | 651 | 2 | 605 | A Chain A, Peanut Peroxidase |
PDB | 1iev_A | 0 | 35 | 651 | 2 | 605 | A Chain A, Peanut Peroxidase |
PDB | 1ieq_A | 0 | 35 | 651 | 2 | 605 | A Chain A, Peanut Peroxidase |