y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10023698 |
Family | GH14 |
Protein Properties | Length: 325 Molecular Weight: 36487.2 Isoelectric Point: 6.2907 |
Chromosome | Chromosome/Scaffold: 505 Start: 675716 End: 676905 |
Description | beta-amylase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 1 | 278 | 0 |
MRAFRDNFQHLLGETVVEIQVGMGPAGELRYPSYPEKDGIWKFPGIGAFQCYDKYMLSSLKAAAEGAGKPEWGSTGPTDAGEYNNWPEDTQFFRKENGGW ASPYGEFFLNWYSQMLLDHGERILTSATSTFKNTGTKISVKVAGIHWHYGTRSHAPELTAGYYNTRFHDGYIPIARMLARHGAVFNFTCIEMRDHEQPQD ALCAPEKLVKQVALATREAQVPLAGENALPRFDDYAHEQIVEAASLNIDEKTDERQMCAFTYLRMTPTLFEPENWGRF |
Full Sequence |
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Protein Sequence Length: 325 Download |
MRAFRDNFQH LLGETVVEIQ VGMGPAGELR YPSYPEKDGI WKFPGIGAFQ CYDKYMLSSL 60 KAAAEGAGKP EWGSTGPTDA GEYNNWPEDT QFFRKENGGW ASPYGEFFLN WYSQMLLDHG 120 ERILTSATST FKNTGTKISV KVAGIHWHYG TRSHAPELTA GYYNTRFHDG YIPIARMLAR 180 HGAVFNFTCI EMRDHEQPQD ALCAPEKLVK QVALATREAQ VPLAGENALP RFDDYAHEQI 240 VEAASLNIDE KTDERQMCAF TYLRMTPTLF EPENWGRFVG LVKKMKEGKG DGRCLEQMER 300 GAEHLVHISR PVVQEAAVPV ALAR* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 2.0e-83 | 1 | 285 | 289 | + beta-amylase | ||
PLN02161 | PLN02161 | 8.0e-90 | 1 | 285 | 291 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-107 | 1 | 285 | 288 | + beta-amylase | ||
PLN02803 | PLN02803 | 2.0e-148 | 1 | 323 | 323 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 318 | 318 | + beta-amylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN71375.1 | 0 | 1 | 320 | 251 | 568 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 1 | 320 | 254 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 1 | 318 | 241 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314522.1 | 0 | 1 | 320 | 153 | 472 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 1 | 320 | 253 | 572 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2dqx_A | 0 | 1 | 285 | 158 | 441 | A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean |
PDB | 1q6d_A | 0 | 1 | 285 | 158 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1wdp_A | 0 | 1 | 285 | 158 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1q6c_A | 0 | 1 | 285 | 158 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 1 | 285 | 158 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 318 | 1 | 318 | 0 |
HO798206 | 318 | 1 | 318 | 0 |
GW867385 | 252 | 74 | 325 | 0 |
GW867167 | 250 | 76 | 325 | 0 |
DY279190 | 324 | 1 | 324 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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