| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10023700 |
| Family | GH14 |
| Protein Properties | Length: 567 Molecular Weight: 62794.1 Isoelectric Point: 6.4268 |
| Chromosome | Chromosome/Scaffold: 505 Start: 681681 End: 683750 |
| Description | beta-amylase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 100 | 519 | 0 |
| FVMMPLDSVTMNNTMNRKKAMSVSLQALKSAGVEGIMVDVWWGLVERDAPGVYNWGGYSDLFEMANHLGLKVQAVMSFHQCGGNVGDSCNISLPNWVMEE MNKDQDLAYTDQWGRRNYEYLSLGSDTLPVLQGRSPIQCYAGFMSAFRDQFKHLLGHTIVEIQLGMGPAGELRYPSYPEQDGTWKFPGIGAFQCYDKYML NNLRAAAEAAGKPEWGSSGPTDAGQYNNWPEDTQFFRKDNGGWTSPYGEFFLNWYSKMLLDHGERIMSSATSIFNNDDTKISVKVAGIHWHYGSQSHAPE LTAGYYNTKNHNGYLPIARMLARHGAIFNFTCIEMRDHEQPHDALCAPEKLVKQVALATRDTQIGLAGENALPRYDEYAHEQILHASSLKIGENDEKKMC AFTYLRMNPTLFEADNWRPF | |||
| Full Sequence |
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| Protein Sequence Length: 567 Download |
| MAIKAAHQLG ALQGSRLLVE TIPSACPLLA NRMSQRMDLA EQRSPPAILG CNGGEGKRAH 60 TLVTRSALAT EAIPESVDGE SMMHRGGGGS NHASNGVPVF VMMPLDSVTM NNTMNRKKAM 120 SVSLQALKSA GVEGIMVDVW WGLVERDAPG VYNWGGYSDL FEMANHLGLK VQAVMSFHQC 180 GGNVGDSCNI SLPNWVMEEM NKDQDLAYTD QWGRRNYEYL SLGSDTLPVL QGRSPIQCYA 240 GFMSAFRDQF KHLLGHTIVE IQLGMGPAGE LRYPSYPEQD GTWKFPGIGA FQCYDKYMLN 300 NLRAAAEAAG KPEWGSSGPT DAGQYNNWPE DTQFFRKDNG GWTSPYGEFF LNWYSKMLLD 360 HGERIMSSAT SIFNNDDTKI SVKVAGIHWH YGSQSHAPEL TAGYYNTKNH NGYLPIARML 420 ARHGAIFNFT CIEMRDHEQP HDALCAPEKL VKQVALATRD TQIGLAGENA LPRYDEYAHE 480 QILHASSLKI GENDEKKMCA FTYLRMNPTL FEADNWRPFV GLVKKMKEGK GANRCAEQLE 540 REAEHFVHIS EPLLVREVDA VAAAVR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 3.0e-136 | 42 | 526 | 489 | + beta-amylase | ||
| PLN02161 | PLN02161 | 4.0e-140 | 97 | 526 | 440 | + beta-amylase | ||
| PLN02801 | PLN02801 | 3.0e-176 | 95 | 526 | 436 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 1 | 554 | 569 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 67 | 534 | 468 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71375.1 | 0 | 7 | 554 | 5 | 561 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285569.1 | 0 | 2 | 554 | 3 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311706.1 | 0 | 3 | 554 | 1 | 553 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314522.1 | 0 | 95 | 554 | 5 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518196.1 | 0 | 1 | 554 | 1 | 565 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 95 | 526 | 4 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgi_A | 0 | 91 | 526 | 4 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgb_A | 0 | 91 | 526 | 4 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xg9_A | 0 | 91 | 526 | 4 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xfy_A | 0 | 91 | 526 | 4 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO779314 | 401 | 155 | 554 | 0 |
| HO826564 | 402 | 153 | 554 | 0 |
| HO798206 | 339 | 217 | 554 | 0 |
| DT555349 | 320 | 184 | 502 | 0 |
| BU103692 | 434 | 96 | 529 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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