Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10023927 |
Family | GT47 |
Protein Properties | Length: 538 Molecular Weight: 61248.8 Isoelectric Point: 9.2059 |
Chromosome | Chromosome/Scaffold: 177 Start: 561931 End: 563787 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 205 | 488 | 0 |
SLLKVYVYQDGEKPIFHEYILEGIYASEGWFMKLMENNKHFVTKDPSKAHLFYIPFSSRLLELKLYVRKSHSRVNLVEYMKSFVDMLGEKYPFWNRTDGT DHFVAACHDWAPAETRGRMLKSIRALCNSDLEVGFTIGKDVSLPETYIRSAKNPLKNLETDLPSSFQRKILAFFAGNVHGYVRPILLEHWENKDPEMRIT GPMPHVKGGRNYIEMMKSSKFCICPRGFEVNSPRIVESIFFECVPVVISDNFVPPFFEVLQWESFAVFVLEKDIPNLKKILVSI |
Full Sequence |
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Protein Sequence Length: 538 Download |
MNNGIQFLCH AEARRLLLLV GAAFVLVIAV QYFEIPSIGA FSSLFVGNAS SLMSNGDGLG 60 GTATTPSLVS RSNVDSENAS TARKAMPPVE SGSSIVNAAK NNNNSSPVAV NSSIASIHGV 120 KPGKNKKYKP PSKVVPISEM NNLLHQRYAS SPSMIPKLSS EVDKEMLHAR SEIEKAAVRR 180 DDPELYAPIY RNVSMFKRSY ELMESLLKVY VYQDGEKPIF HEYILEGIYA SEGWFMKLME 240 NNKHFVTKDP SKAHLFYIPF SSRLLELKLY VRKSHSRVNL VEYMKSFVDM LGEKYPFWNR 300 TDGTDHFVAA CHDWAPAETR GRMLKSIRAL CNSDLEVGFT IGKDVSLPET YIRSAKNPLK 360 NLETDLPSSF QRKILAFFAG NVHGYVRPIL LEHWENKDPE MRITGPMPHV KGGRNYIEMM 420 KSSKFCICPR GFEVNSPRIV ESIFFECVPV VISDNFVPPF FEVLQWESFA VFVLEKDIPN 480 LKKILVSISE ERYMEMHKRV KMVQKHFLWH DQPFKYDLFH MLLHSVWYNR VFQMTPS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-69 | 203 | 488 | 306 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002281263.1 | 0.009 | 1 | 142 | 1 | 136 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281263.1 | 0 | 134 | 534 | 267 | 666 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309546.1 | 0 | 129 | 537 | 21 | 417 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002309547.1 | 0 | 74 | 536 | 14 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516500.1 | 0 | 130 | 537 | 51 | 456 | catalytic, putative [Ricinus communis] |