| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10023974 |
| Family | GH35 |
| Protein Properties | Length: 262 Molecular Weight: 29969.1 Isoelectric Point: 7.9132 |
| Chromosome | Chromosome/Scaffold: 177 Start: 745915 End: 748057 |
| Description | beta-galactosidase 10 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 89 | 247 | 7.6e-36 |
| RSDPQFYMEKFMTYITNLMKQEKLFASQGDNGPIILAQASTKQSFSVENEYQYYEQFYGVGKRYAYWAANMAVSQHTGVPWIMCQEPDAPDPVIDTCNSF YCDAFQPTSPNKPKIWTENWTGWFQSYGQPIPHRPAQDIAFSVVRFFQKGGSVVNYYMV | |||
| Full Sequence |
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| Protein Sequence Length: 262 Download |
| MISFVRDSGF QSKGWSMILH FLTLELMRAE ELMFSSAEKL KKGRPQHHAS PSLQILCSAN 60 DDEVSYDSRS LIIHGRRHLI ISASIHCPRS DPQFYMEKFM TYITNLMKQE KLFASQGDNG 120 PIILAQASTK QSFSVENEYQ YYEQFYGVGK RYAYWAANMA VSQHTGVPWI MCQEPDAPDP 180 VIDTCNSFYC DAFQPTSPNK PKIWTENWTG WFQSYGQPIP HRPAQDIAFS VVRFFQKGGS 240 VVNYYMVKRT FIMFPSSPSS V* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03059 | PLN03059 | 2.0e-5 | 64 | 95 | 32 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-49 | 90 | 247 | 173 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 2.0e-56 | 96 | 246 | 152 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF70823.1 | 0.0005 | 62 | 95 | 44 | 77 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
| GenBank | AAF70823.1 | 0 | 90 | 246 | 163 | 311 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
| RefSeq | XP_002310540.1 | 0 | 93 | 246 | 143 | 289 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522927.1 | 0.0004 | 55 | 101 | 23 | 66 | beta-galactosidase, putative [Ricinus communis] |
| RefSeq | XP_002522927.1 | 0 | 93 | 246 | 150 | 294 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.0002 | 79 | 228 | 113 | 261 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EY156770 | 170 | 78 | 246 | 0 |
| DY638395 | 168 | 81 | 246 | 0 |
| GW617038 | 184 | 64 | 246 | 0 |
| FL764386 | 154 | 95 | 246 | 0 |
| DN225782 | 154 | 95 | 246 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Capsella rubella | Carubv10016770m | ||||
| Linum usitatissimum | Lus10025110.157.313 | Lus10025110.157.313 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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