Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10024050 |
Family | CE8 |
Protein Properties | Length: 189 Molecular Weight: 21229.1 Isoelectric Point: 6.9723 |
Chromosome | Chromosome/Scaffold: 353 Start: 226247 End: 227434 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 8 | 168 | 0 |
ARLIGTADRCGFYNCRFLGWQDTLYLHGKQYRKDCYIEGSVDFISGNSTALLEHCHIHCKPEGFITAQGRKSSQETTGYVFLRCVITGNGNASYMHLGRP WGPFGRVVFAYTYMDHASLLEDGLTGTMCFRPGSCPSGRVGWCRELIDEEADQFVMHGFID |
Full Sequence |
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Protein Sequence Length: 189 Download |
MIDHYQGARL IGTADRCGFY NCRFLGWQDT LYLHGKQYRK DCYIEGSVDF ISGNSTALLE 60 HCHIHCKPEG FITAQGRKSS QETTGYVFLR CVITGNGNAS YMHLGRPWGP FGRVVFAYTY 120 MDHASLLEDG LTGTMCFRPG SCPSGRVGWC RELIDEEADQ FVMHGFIDPN PEMSWLAQRM 180 AVRIPHSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 1.0e-36 | 13 | 170 | 188 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 1.0e-44 | 14 | 176 | 180 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-46 | 13 | 176 | 180 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 6.0e-54 | 6 | 168 | 180 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 4.0e-108 | 13 | 188 | 190 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 6 | 188 | 120 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 6 | 188 | 121 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 6 | 188 | 120 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 6 | 188 | 120 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 6 | 188 | 120 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-17 | 4 | 115 | 111 | 234 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0.000000000000005 | 14 | 121 | 117 | 236 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.0000000006 | 10 | 123 | 135 | 274 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.0000000006 | 10 | 123 | 135 | 274 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.0000000006 | 10 | 123 | 135 | 274 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV113912 | 198 | 6 | 189 | 0 |
FY831269 | 191 | 13 | 189 | 0 |
GO323839 | 191 | 13 | 189 | 0 |
GO324436 | 191 | 13 | 189 | 0 |
CB970039 | 198 | 6 | 189 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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