| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10024155 |
| Family | GH2 |
| Protein Properties | Length: 1079 Molecular Weight: 121289 Isoelectric Point: 6.0525 |
| Chromosome | Chromosome/Scaffold: 353 Start: 800551 End: 807681 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 88 | 944 | 0 |
| PYVRSLSGFWKFFLAPCPSKVPPAFFDVAFQDSEWGMLPVPSNWQMHGFDKPIYTNVVYPFPLDPPHVPQDDNPTGCYRTCFQIPTEWQGRRIFLHFEAV DSAFFVWVNGVLVGYSQDSRLPAEFEISDHCYPSGSDEMNILAVQVLRWSDGSYLEDQDHWWLSGIHRDVLLLSKPQVFITDYYFKSSLTEDFSSSDIQV EVKIDNTRANPKDDIRASFTMDAALYDTGSWYAGDKSGLISTNVANLTAIPSSDAILGFIGYTLAGKLDMPKLWSAEQPNLYILVVTLKDVSGHVVDCES SLVGIRQVSKAPKQLLVNGKPVMIRGVNRHEHHPRIGKTNIESCMIKDLVLMKQYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFHLSGHLK PPAMEICWATAILDRVIGMVERDKNHASIISWSLGNESSYGPNHSAAAGWIREKDTSRLLHYEGGGSRTSSTDIICPMYMRVWDILKIAKDPTELRPLIL CEYSHAMGNSNGSLDEYWEAIDSTFGLQGGFIWDWVDQGLLKESTDGSKHWAYGGDFGDTPNDLNFCLNGLIWPDRTPHPAMHELKYVYQPIKVSIKDGK LKIINTNFFDTTQLLGFTWAAHGDGIELGSGELSLPVIEPQKSYEMKWESAGHIISSTQLQLPGRKEILPHALKSKDATICTEVVGDTIRISHQSLWEIT FNKLTGAVASWKVKGVSVLNKGIFPCFWRAPTDNDKGGEDRSYYSKWKAAHLDSIIFETKSCSIQNSANDHVKIEVVYSGIPRDGDGSTTLFQVEMTYII HGSGDLIVKCKATPSSNLPPLPRVGVEFHLEKTMDQVSWYGRGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 1079 Download |
| MSASLPSPGL VFPFEDVSHR VWEDPSFIKW RKRDPHVPLH CHESVQGSLK YWHQRNRVDV 60 LLSKSAVWGD DAVQEALDSA AFWVKELPYV RSLSGFWKFF LAPCPSKVPP AFFDVAFQDS 120 EWGMLPVPSN WQMHGFDKPI YTNVVYPFPL DPPHVPQDDN PTGCYRTCFQ IPTEWQGRRI 180 FLHFEAVDSA FFVWVNGVLV GYSQDSRLPA EFEISDHCYP SGSDEMNILA VQVLRWSDGS 240 YLEDQDHWWL SGIHRDVLLL SKPQVFITDY YFKSSLTEDF SSSDIQVEVK IDNTRANPKD 300 DIRASFTMDA ALYDTGSWYA GDKSGLISTN VANLTAIPSS DAILGFIGYT LAGKLDMPKL 360 WSAEQPNLYI LVVTLKDVSG HVVDCESSLV GIRQVSKAPK QLLVNGKPVM IRGVNRHEHH 420 PRIGKTNIES CMIKDLVLMK QYNINAVRNS HYPQHPRWYE LCDLFGMYMI DEANIETHGF 480 HLSGHLKPPA MEICWATAIL DRVIGMVERD KNHASIISWS LGNESSYGPN HSAAAGWIRE 540 KDTSRLLHYE GGGSRTSSTD IICPMYMRVW DILKIAKDPT ELRPLILCEY SHAMGNSNGS 600 LDEYWEAIDS TFGLQGGFIW DWVDQGLLKE STDGSKHWAY GGDFGDTPND LNFCLNGLIW 660 PDRTPHPAMH ELKYVYQPIK VSIKDGKLKI INTNFFDTTQ LLGFTWAAHG DGIELGSGEL 720 SLPVIEPQKS YEMKWESAGH IISSTQLQLP GRKEILPHAL KSKDATICTE VVGDTIRISH 780 QSLWEITFNK LTGAVASWKV KGVSVLNKGI FPCFWRAPTD NDKGGEDRSY YSKWKAAHLD 840 SIIFETKSCS IQNSANDHVK IEVVYSGIPR DGDGSTTLFQ VEMTYIIHGS GDLIVKCKAT 900 PSSNLPPLPR VGVEFHLEKT MDQVSWYGRG PFECYPDRKA AAHVGVYEQK VADMHVPYIV 960 PGECGGRTDV RWVTFRDKDG VGIFASSYGN SPPLQVSASY YSTSELDRAT HNERLIQGND 1020 IEVHLDHKHM GLGGDDSWSP CVHEKFLVPA MPYTFSLRMC PVTAQTSGLD TYQSQVQN* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 2.0e-101 | 784 | 1059 | 277 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 3.0e-110 | 399 | 680 | 292 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 2.0e-155 | 90 | 942 | 866 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 20 | 1061 | 1100 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 76 | 1065 | 1020 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 10 | 1078 | 8 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 10 | 1078 | 8 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 10 | 1078 | 8 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 10 | 1078 | 8 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 3 | 1078 | 2 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 90 | 1060 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 90 | 1060 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 90 | 1060 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 90 | 1060 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1jz7_D | 0 | 90 | 1060 | 51 | 1021 | A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO804274 | 386 | 132 | 513 | 0 |
| EL444301 | 298 | 441 | 738 | 0 |
| EY819313 | 269 | 350 | 618 | 0 |
| HO804274 | 50 | 504 | 552 | 0.000002 |
| EY819313 | 25 | 620 | 644 | 6.6 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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