Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10024535 |
Family | CBM43 |
Protein Properties | Length: 504 Molecular Weight: 54497.5 Isoelectric Point: 5.0564 |
Chromosome | Chromosome/Scaffold: 45 Start: 329371 End: 330978 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 376 | 457 | 7.6e-24 |
WCVMSPDASLDNPDVGPSVSYACANADCTSLGYGTSCSNLDQKLNISYAFNDYYQQNDQQEIACKFHNLSIVTSQDPSVGQC | |||
GH17 | 28 | 349 | 0 |
GVNWGTQATHPLAPSTVVRMMKDNGIQKVKLFDANTSALNALRGSGIQVMVGIPNDMLLILSQSSDAADKWVAKNLSSHLSHGVDIRYVAVGNEAFLKAL NGTYMGSTLPALEKIQSAISKAGLSNRVKVSTPLNADVYESASNRPSDGDFRADIHGLMLSIVKFLSDNGAPFIVNIYPFISLYKDPNFPVGFAFFDNSN TSSSSSAPIDDGGITYTNVFDANHDTLVHALQKNGYGNLSIVVGEIGWPTDGDRSANLNYAQQFNQGLITRVNSGQGTPMRPGPVDAYLFSLIDEDAKSV EPGNFERHWGLFYYDGQPKYEL |
Full Sequence |
---|
Protein Sequence Length: 504 Download |
MGWMMMRAYG GAVVVVVAVM ATLVDGFGVN WGTQATHPLA PSTVVRMMKD NGIQKVKLFD 60 ANTSALNALR GSGIQVMVGI PNDMLLILSQ SSDAADKWVA KNLSSHLSHG VDIRYVAVGN 120 EAFLKALNGT YMGSTLPALE KIQSAISKAG LSNRVKVSTP LNADVYESAS NRPSDGDFRA 180 DIHGLMLSIV KFLSDNGAPF IVNIYPFISL YKDPNFPVGF AFFDNSNTSS SSSAPIDDGG 240 ITYTNVFDAN HDTLVHALQK NGYGNLSIVV GEIGWPTDGD RSANLNYAQQ FNQGLITRVN 300 SGQGTPMRPG PVDAYLFSLI DEDAKSVEPG NFERHWGLFY YDGQPKYELR LTTANSNNNN 360 AGLVPAKDVE YLPRRWCVMS PDASLDNPDV GPSVSYACAN ADCTSLGYGT SCSNLDQKLN 420 ISYAFNDYYQ QNDQQEIACK FHNLSIVTSQ DPSVGQCRFR VMIQTELGTW LSASASSGSA 480 LQLMNNTLGF AIYVFVGLVL MFL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-5 | 264 | 342 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-13 | 375 | 441 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-27 | 376 | 459 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-79 | 28 | 349 | 324 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_194843.1 | 0 | 4 | 473 | 1 | 462 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002324127.1 | 0 | 24 | 503 | 38 | 498 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330836.1 | 0 | 16 | 466 | 27 | 469 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528007.1 | 0 | 11 | 502 | 12 | 487 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002530371.1 | 0 | 24 | 468 | 20 | 455 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 349 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 28 | 351 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 28 | 351 | 2 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 28 | 351 | 2 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_B | 0 | 28 | 351 | 4 | 314 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |