Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10024961 |
Family | GT47 |
Protein Properties | Length: 611 Molecular Weight: 69630.7 Isoelectric Point: 6.6077 |
Chromosome | Chromosome/Scaffold: 473 Start: 944314 End: 946146 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 142 | 483 | 0 |
CGGRYIYVHNLPSRFNDDMLKECRSLSLWTNMCKFTTNAGMGPPLENVEGVFSNTGWYATNQFAVDVIFNNRMKQYDCLTNDSSLAAAIFVPFYAGFDIA RYLWGHPISRRDAASLDLVDWLMKRPEWEIMQGRDHFLVAGRITWDFRRLSEEEGDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDAD VFAWQERMRNLERKYLFSFAGAPRPGNAKSIRGQIIDQCRSSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFH PGSAYTQYTWHLPKNYTTYSVFIPEDDIRKRNLSIEERLSQI |
Full Sequence |
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Protein Sequence Length: 611 Download |
MGGLKFLTRR TSRPATTDDA LEQMDKGNGK NQQNRVCLLA SLSAFFWILL LYFHFVVLSG 60 RTFSDQSLTT LQSNPPAVDD FRTSFPNPIP KKEVEESESE SPPIPKYGEK SLPIPEVTDE 120 EPPKSFTFTR ALRTVENKTD KCGGRYIYVH NLPSRFNDDM LKECRSLSLW TNMCKFTTNA 180 GMGPPLENVE GVFSNTGWYA TNQFAVDVIF NNRMKQYDCL TNDSSLAAAI FVPFYAGFDI 240 ARYLWGHPIS RRDAASLDLV DWLMKRPEWE IMQGRDHFLV AGRITWDFRR LSEEEGDWGN 300 KLLFLPAAKN MSMLVVESSP WNANDFGIPY PTYFHPAKDA DVFAWQERMR NLERKYLFSF 360 AGAPRPGNAK SIRGQIIDQC RSSKVGKLLE CDFGESKCHS PSSIMQMFQS SLFCLQPQGD 420 SYTRRSAFDS MLAGCIPVFF HPGSAYTQYT WHLPKNYTTY SVFIPEDDIR KRNLSIEERL 480 SQIPPEQVRI MRENVIKLIP QLIYADPRSK LETFKDAFDV AVQAVIDKVT RLRKNMIEGR 540 TEYDNFVEEN SWKYALLEEG QREVGGHEWD PFFSKPKPND GGGGTGGESS TGSVAEAAKN 600 SWKNEQRDQK * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-69 | 141 | 483 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21751.1 | 0 | 24 | 609 | 1 | 598 | unknown protein [Arabidopsis thaliana] |
GenBank | ACY08857.1 | 0 | 22 | 609 | 12 | 616 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 7 | 609 | 7 | 617 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 7 | 609 | 7 | 617 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002301846.1 | 0 | 24 | 609 | 1 | 584 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |