| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10025054 |
| Family | GH10 |
| Protein Properties | Length: 547 Molecular Weight: 61380.4 Isoelectric Point: 6.3043 |
| Chromosome | Chromosome/Scaffold: 305 Start: 44930 End: 47910 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 201 | 481 | 0 |
| LSKDFPFGSAISKTILGNHPYQKWYLERFNAAVFENELKWYATEPKQGQLNYTIPDKMMEFVRSNGLLTRGHNIFWEDPKYTPEWVKQLAGKQLHAAVES RIRSLMNKYREEFVNWDVSNEMLHFNFYEEKLGRDATLHFFKTAHESDPLATLFMNDYNVVESCTDLNSTVDNYIGRLKELQQGGATMDGIGLESHFSEP NPPLTRAIIDKLAVLNLPIWLTEVDISKKFDYQTQARYLEKVLREGFSHPAVDGIMLWTALDTKGCYEMCLTDNDMKNLPA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 547 Download |
| MASSLMGSIS LLLCFSFASA FDGPLYDHTA YIECQGTPEQ PLYGGGILKH RRPVQWKDNG 60 DSSPAFVLSN ITQGSFYSFS VWVKVKAGKP TTVTARLKTD EATYGCIGSV LAKKNCWSFL 120 KGGFVLEEEP SASTILYLQS PSQKSLAVSI TSGSLQPFTS EEWTANQQNI IDTQRKRAVT 180 VHVSDSTGNR LKGASIKVQQ LSKDFPFGSA ISKTILGNHP YQKWYLERFN AAVFENELKW 240 YATEPKQGQL NYTIPDKMME FVRSNGLLTR GHNIFWEDPK YTPEWVKQLA GKQLHAAVES 300 RIRSLMNKYR EEFVNWDVSN EMLHFNFYEE KLGRDATLHF FKTAHESDPL ATLFMNDYNV 360 VESCTDLNST VDNYIGRLKE LQQGGATMDG IGLESHFSEP NPPLTRAIID KLAVLNLPIW 420 LTEVDISKKF DYQTQARYLE KVLREGFSHP AVDGIMLWTA LDTKGCYEMC LTDNDMKNLP 480 AGDTVDKLLR EWSTGEVNGS SDERGSYSFY GYLGEYSVKV EYGGRVVNST LALSKGDETK 540 QLSIRV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 3.0e-38 | 203 | 442 | 253 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 3.0e-57 | 199 | 458 | 276 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 1.0e-75 | 238 | 485 | 269 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94920.1 | 0 | 26 | 546 | 39 | 563 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI37893.1 | 0 | 9 | 546 | 83 | 625 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195577.2 | 0 | 15 | 546 | 20 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277675.1 | 0 | 17 | 546 | 19 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002534153.1 | 0 | 80 | 546 | 8 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2g4f_B | 2e-30 | 207 | 463 | 16 | 271 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 2g4f_A | 2e-30 | 207 | 463 | 16 | 271 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 2g3j_A | 2e-30 | 207 | 463 | 16 | 271 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 2g3i_A | 2e-30 | 207 | 463 | 16 | 271 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
| PDB | 1xyf_B | 4e-30 | 207 | 463 | 16 | 271 | A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis |
