| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10025108 |
| Family | GH35 |
| Protein Properties | Length: 1461 Molecular Weight: 162475 Isoelectric Point: 4.9636 |
| Chromosome | Chromosome/Scaffold: 305 Start: 309511 End: 330672 |
| Description | beta-galactosidase 10 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 144 | 263 | 3.8e-26 |
| KVENEYGFVQEFYGDGGKQYAKWAAAMAVAQNTGVPWIMCTQFDVPDLVINTCNSFYCDGFKPLSPNWPKLWTENWSGWCQTFGSTNPHRSTEDLAFSVA RFFQKGGSLNNYYMVTSQTS | |||
| GH35 | 29 | 144 | 0 |
| LIIDGQRKLLISAAIHYPRSVPEQMWPGLVQTAKEGGVDAIDTYVFWNGHEIAPSVYNFEGRYDLVKFVKIVQEAGLYFILRIGPYIGAEWNYGGLPVWL HNIPGTVFRSDNENFK | |||
| GH35 | 641 | 935 | 0 |
| SLVEKMWPGLVQTAKEGGVDTIETYVFWNGHEIAPSVYNFEGRYDLVKFVKIVQEAGLYLILRIGPAVAAEWNYGGVPAWLHYIPGTVFRTDNESFKNHM QSFMTYIVNLMKQEKLFASQGGPIILAQASKTITQETVENEYGFYEQYYGEGGKKYAIWAANMAVAQNTGVPWIMCQQFDAPDSVINTCNDFYCDGFIPL SPNKPKIWTENWTGWFQYFGAPNPHRPTEDLAFSVARFFQKGGSVNNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPRLQKWGHLKELHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1461 Download |
| MGRLYFFITF VLFFEMGFSG NVTYDGRSLI IDGQRKLLIS AAIHYPRSVP EQMWPGLVQT 60 AKEGGVDAID TYVFWNGHEI APSVYNFEGR YDLVKFVKIV QEAGLYFILR IGPYIGAEWN 120 YGGLPVWLHN IPGTVFRSDN ENFKVENEYG FVQEFYGDGG KQYAKWAAAM AVAQNTGVPW 180 IMCTQFDVPD LVINTCNSFY CDGFKPLSPN WPKLWTENWS GWCQTFGSTN PHRSTEDLAF 240 SVARFFQKGG SLNNYYMVTS QTSVVEMVPE GLRPSAKSLE DDSKTLNWEV FVEKAGIWGE 300 ADLVKNSLED HLNITKDASD YLCITVGDDE QFLKQGQPPV LTIASKGHAL HVFVNGQLQG 360 SASGSRASKY FEYREPITLK AGKNEISLLS MTVGLICFGH LFEWDPAGLT SVKIEGFNNG 420 TMDLSTFDWS YKIGMQGENL GIHSPSGMNS VNWTPNPVVP KMQPLTWYKT TVDPPTGDEP 480 IGLDMLNMGK GLAWLNGEEI GRYWLRESPK DDRCAEECDY RGEIFLQFDP VIEFFPQKCY 540 TGCGEPTQRW YHVPRSWFKP SGNILVIFEE TGGDPTAIKF SKRRTSGVCA SVGEDYPIST 600 LSLKCPEDAN ISRVIFASFG TPLGTCGSYK VGDCHHPDST SLVEKMWPGL VQTAKEGGVD 660 TIETYVFWNG HEIAPSVYNF EGRYDLVKFV KIVQEAGLYL ILRIGPAVAA EWNYGGVPAW 720 LHYIPGTVFR TDNESFKNHM QSFMTYIVNL MKQEKLFASQ GGPIILAQAS KTITQETVEN 780 EYGFYEQYYG EGGKKYAIWA ANMAVAQNTG VPWIMCQQFD APDSVINTCN DFYCDGFIPL 840 SPNKPKIWTE NWTGWFQYFG APNPHRPTED LAFSVARFFQ KGGSVNNYYM YHGGTNFGRT 900 AGGPFITTSY DYDAPIDEYG LPRLQKWGHL KELHKSIKLC ENALATSQPD SISLGPTQEV 960 DVFADASGAC CAFLANSDAQ NDMTVTFRNS SYHLPAWSVS ILSDCRNEIF NTAKVTSQAS 1020 VVEMVPEGLR PSINLSEIDS TTLNWEVFVE KTGIWGEADF VKNSLEDHIN ATKDASDYLW 1080 YTTRLESLIH PQYVASIITV GDDEQFLKQG QPPVLTIASK GHALHVYVNG QLQGSAFGNS 1140 AFASFEYKAT ITLKAGNNVI SLLSMTVGLT STGPQYEWTP AGLTSVKIEG LNGGTVDLST 1200 YEWTYKIGLQ GENLAIHSPR GMNSVNWTPT PIVPKMQPLT WYKTTVDPPT GDEPIGLDML 1260 NMGKGLAWLN GEEIGRYWLR EIAKDERCTE ECDYRGKLAL TSGPMAEFMV QKCSTGCGEP 1320 SQRWYHIPRS LFKPSGNILL IFEEIGGDPT LIKFSKRRIS GVCASIGEDY PSGTLHLQCP 1380 KDANISSVKF SSFGTPTGTC GSYKAGDCHD PNSIFTVEKE CLNRNECSIQ VSEEKFSMGN 1440 CRADSTVRKR LAVEVVCGSS * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-93 | 28 | 258 | 272 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 2.0e-97 | 6 | 257 | 288 | + beta-galactosidase; Provisional | ||
| PLN03059 | PLN03059 | 4.0e-98 | 254 | 645 | 414 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-125 | 646 | 937 | 304 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 632 | 1457 | 844 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21600.1 | 0 | 18 | 257 | 19 | 288 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI21600.1 | 0 | 220 | 646 | 365 | 812 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI21600.1 | 0 | 635 | 1457 | 45 | 846 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002310540.1 | 0 | 280 | 645 | 415 | 791 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002310540.1 | 0 | 635 | 1457 | 43 | 826 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9e-35 | 630 | 920 | 25 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 9e-24 | 28 | 263 | 14 | 284 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 5e-29 | 608 | 949 | 10 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
