| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10025892 |
| Family | CBM43 |
| Protein Properties | Length: 425 Molecular Weight: 47063.1 Isoelectric Point: 9.7303 |
| Chromosome | Chromosome/Scaffold: 605 Start: 842289 End: 845247 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 333 | 417 | 5.9e-28 |
| WCVVGETAANTTAVLDALSWACSQGKGLCDPIQPSGKCFKPDSVSWHASYAFSAYWAEFKKAGGTCSFNGLATLTVKDPSVGECK | |||
| GH17 | 18 | 281 | 0 |
| GINYGQLGNNLPSPARSVHLIKSLKAKRVKIYDANPKILRAFKGTDLQLSIMVPNDLIPNVSASQSFSDRWVLTNVVPFYPATKIRYLLVGNEILTNPYI GTWSNLVPAMRRIKLSLHKFRLHKIKVSTPHATNVLESSFPPSNGTFRSDVSVPIMKPMLQFLNRTRSFFFLDVYPFFPWSADPKNIRLDYALLQPSNFT YTDPVSKLTYTNLFDQIVDATIFAMKRLGYPDIRIFIAETGWPSAGDIDQIGANIHNAAVYNRA | |||
| Full Sequence |
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| Protein Sequence Length: 425 Download |
| MRACYERSDR AEISSRAGIN YGQLGNNLPS PARSVHLIKS LKAKRVKIYD ANPKILRAFK 60 GTDLQLSIMV PNDLIPNVSA SQSFSDRWVL TNVVPFYPAT KIRYLLVGNE ILTNPYIGTW 120 SNLVPAMRRI KLSLHKFRLH KIKVSTPHAT NVLESSFPPS NGTFRSDVSV PIMKPMLQFL 180 NRTRSFFFLD VYPFFPWSAD PKNIRLDYAL LQPSNFTYTD PVSKLTYTNL FDQIVDATIF 240 AMKRLGYPDI RIFIAETGWP SAGDIDQIGA NIHNAAVYNR AMPGQGTERH FGLLYPNGTA 300 VYEIDLSGET PLSGYKKPLP PPTNNEPYKG KLWCVVGETA ANTTAVLDAL SWACSQGKGL 360 CDPIQPSGKC FKPDSVSWHA SYAFSAYWAE FKKAGGTCSF NGLATLTVKD PSVGECKVPS 420 GRLV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-18 | 332 | 405 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-32 | 332 | 417 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-93 | 18 | 305 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89481.1 | 0 | 11 | 423 | 34 | 478 | beta-1,3-glucanase [Salix gilgiana] |
| EMBL | CBI39470.1 | 0 | 11 | 420 | 23 | 464 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002303070.1 | 0 | 11 | 423 | 17 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 11 | 423 | 21 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002534357.1 | 0 | 69 | 424 | 1 | 388 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 18 | 306 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 18 | 306 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 18 | 306 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 5.60519e-45 | 18 | 306 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 5.60519e-45 | 18 | 306 | 2 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG656601 | 242 | 36 | 277 | 0 |
| EX291357 | 358 | 92 | 414 | 0 |
| ES815922 | 270 | 11 | 280 | 0 |
| DW092167 | 279 | 11 | 289 | 0 |
| DY288113 | 272 | 11 | 280 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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