Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10026047 |
Family | CE8 |
Protein Properties | Length: 318 Molecular Weight: 35446 Isoelectric Point: 7.6543 |
Chromosome | Chromosome/Scaffold: 319 Start: 461127 End: 462961 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 7 | 297 | 0 |
ITVAQDGSGDFTTVQQAVDAVPLGNNFRTLIRVSPGVYKQPVYVPKTKNFITLAGLRPEDTILTWNNTATKIDHHQGARLIGTGTFGCGSVIVEGEDFIA ENITFENSAPQGSGQAVALRVTADRCGFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQGRKSSQESTGYVFLR CVITGNGKASYTYLGRPWGPFGRVVFAYTYMDHCIRHVGWNNWGKSENERSACFYEYRCYGPGSCPSKRVGWCRELIDEEADQFVMHGFID |
Full Sequence |
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Protein Sequence Length: 318 Download |
MSAGRVITVA QDGSGDFTTV QQAVDAVPLG NNFRTLIRVS PGVYKQPVYV PKTKNFITLA 60 GLRPEDTILT WNNTATKIDH HQGARLIGTG TFGCGSVIVE GEDFIAENIT FENSAPQGSG 120 QAVALRVTAD RCGFYNCRFL GWQDTLYLHY GKQYLKDCYI EGSVDFIFGN STALLEHCHI 180 HCKSEGFITA QGRKSSQEST GYVFLRCVIT GNGKASYTYL GRPWGPFGRV VFAYTYMDHC 240 IRHVGWNNWG KSENERSACF YEYRCYGPGS CPSKRVGWCR ELIDEEADQF VMHGFIDPNP 300 ERPWLAQRMA VRIPHSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 1.0e-89 | 7 | 299 | 308 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 8.0e-96 | 5 | 305 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-99 | 1 | 297 | 299 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-110 | 5 | 297 | 301 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 317 | 317 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 3 | 317 | 2 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 1 | 317 | 1 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 3 | 317 | 2 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 3 | 317 | 2 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 3 | 317 | 2 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 2 | 278 | 4 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.4013e-45 | 9 | 278 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-25 | 6 | 303 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-25 | 6 | 303 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-25 | 6 | 303 | 7 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR994392 | 303 | 5 | 307 | 0 |
DY292729 | 313 | 3 | 314 | 0 |
DY292725 | 300 | 3 | 302 | 0 |
ES794113 | 291 | 1 | 291 | 0 |
ES794113 | 30 | 289 | 318 | 0.0002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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