| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10026327 |
| Family | GT77 |
| Protein Properties | Length: 434 Molecular Weight: 48534.4 Isoelectric Point: 7.6942 |
| Chromosome | Chromosome/Scaffold: 898 Start: 643625 End: 645476 |
| Description | Nucleotide-diphospho-sugar transferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT77 | 188 | 408 | 0 |
| IPNYLVVALDDEIAQLCELNDVPFYKRDADEGVDSVGKTGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMTDGHNNMTAYG YNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVAYRLAHETAWDQAVFNEELFYPSHPGYDGLYASRRTMDLYLFMNSKVLFKTVRKDG NLRKVKPVIVHVNYHPDKLPR | |||
| Full Sequence |
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| Protein Sequence Length: 434 Download |
| MMGQREGPLM RNSSTAASVV KSRISVAVAL GILLGCAFAF LYPHGFFTSA TASRINTSLS 60 QVVSSASCEP SDKLNALRAE FAEASEKNSE LQKQVKELTS KLRYAEQIKS QAEIQVAILG 120 QQHKAGPFGT VKGLRTNLAV KPDESVNPRL SSILEKVSVQ KELIVALANS NVKEMLEVWF 180 TSIKKVGIPN YLVVALDDEI AQLCELNDVP FYKRDADEGV DSVGKTGGNH AVSGLKFRIL 240 REFLQLGYSV LLSDVDIVYL QNPFDHLYRD SDVESMTDGH NNMTAYGYND VFDEPSMGWA 300 RYAHTMRIWV YNSGFFYIRP TIPSIELLDR VAYRLAHETA WDQAVFNEEL FYPSHPGYDG 360 LYASRRTMDL YLFMNSKVLF KTVRKDGNLR KVKPVIVHVN YHPDKLPRMK AVVEFYVNGN 420 QEALKSFPDG SGR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09039 | PRK09039 | 0.002 | 77 | 139 | 63 | + hypothetical protein; Validated | ||
| pfam10211 | Ax_dynein_light | 0.002 | 69 | 124 | 56 | + Axonemal dynein light chain. Axonemal dynein light chain proteins play a dynamic role in flagellar and cilia motility. Eukaryotic cilia and flagella are complex organelles consisting of a core structure, the axoneme, which is composed of nine microtubule doublets forming a cylinder that surrounds a pair of central singlet microtubules. This ultra-structural arrangement seems to be one of the most stable micro-tubular assemblies known and is responsible for the flagellar and ciliary movement of a large number of organisms ranging from protozoan to mammals. This light chain interacts directly with the N-terminal half of the heavy chains. | ||
| pfam08614 | ATG16 | 0.0007 | 61 | 162 | 112 | + Autophagy protein 16 (ATG16). Autophagy is a ubiquitous intracellular degradation system for eukaryotic cells. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. ATG16 (also known as Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway. | ||
| pfam03407 | Nucleotid_trans | 2.0e-55 | 188 | 409 | 232 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94035.1 | 0 | 1 | 431 | 1 | 434 | unknown [Populus trichocarpa] |
| RefSeq | NP_001140234.1 | 0 | 1 | 431 | 1 | 422 | hypothetical protein LOC100272274 [Zea mays] |
| RefSeq | XP_002313061.1 | 0 | 1 | 431 | 1 | 434 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002465078.1 | 0 | 3 | 431 | 5 | 424 | hypothetical protein SORBIDRAFT_01g031700 [Sorghum bicolor] |
| RefSeq | XP_002519086.1 | 0 | 1 | 431 | 1 | 434 | conserved hypothetical protein [Ricinus communis] |
