| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10026401 |
| Family | AA1 |
| Protein Properties | Length: 337 Molecular Weight: 36699.6 Isoelectric Point: 9.8592 |
| Chromosome | Chromosome/Scaffold: 898 Start: 950910 End: 951920 |
| Description | laccase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 1 | 319 | 0 |
| MNQELFFSVANHKLTVVEADASYTKPFTTSVIMVGPAQTTNVLLKADQTPGRYYMAARAYQTAQNAAFDNTTTTAILEYKSTKGRTSPVLPQLPAFNDTN TARTFTSQVRSLKSNVNVPKKINKSLFFTVGLGLNNCTNPNSPRCQGPNGTRFTASINNVSFVFPRRNSLMQAYVQGQPGIFTTDFPSSPPVKFDYTGNV SRGLWQPSRGTKLVKLKYGDNVQIVLQDTSIVTTEDHPMHLHGYSFYVVGMGTGNFNAATDTANFNLVDPPHRNTIGTPPGGWVAIRFKADNPGIWLLHC HIDSHLGWGLATALLVENG | |||
| Full Sequence |
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| Protein Sequence Length: 337 Download |
| MNQELFFSVA NHKLTVVEAD ASYTKPFTTS VIMVGPAQTT NVLLKADQTP GRYYMAARAY 60 QTAQNAAFDN TTTTAILEYK STKGRTSPVL PQLPAFNDTN TARTFTSQVR SLKSNVNVPK 120 KINKSLFFTV GLGLNNCTNP NSPRCQGPNG TRFTASINNV SFVFPRRNSL MQAYVQGQPG 180 IFTTDFPSSP PVKFDYTGNV SRGLWQPSRG TKLVKLKYGD NVQIVLQDTS IVTTEDHPMH 240 LHGYSFYVVG MGTGNFNAAT DTANFNLVDP PHRNTIGTPP GGWVAIRFKA DNPGIWLLHC 300 HIDSHLGWGL ATALLVENGV GKLQAVQAAP LDLPRC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 6.0e-35 | 5 | 323 | 334 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-37 | 5 | 323 | 333 | + oxidoreductase | ||
| pfam07731 | Cu-oxidase_2 | 7.0e-41 | 185 | 320 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03388 | ascorbase | 6.0e-46 | 5 | 323 | 336 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 3.0e-151 | 1 | 336 | 339 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_180580.1 | 0 | 1 | 336 | 230 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
| RefSeq | NP_196330.3 | 0 | 1 | 336 | 228 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002319955.1 | 0 | 1 | 336 | 237 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326089.1 | 0 | 1 | 336 | 237 | 576 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516345.1 | 0 | 1 | 336 | 237 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 7.00649e-43 | 5 | 331 | 227 | 536 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1asq_A | 7.00649e-43 | 5 | 331 | 227 | 536 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1asp_B | 7.00649e-43 | 5 | 331 | 227 | 536 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1asp_A | 7.00649e-43 | 5 | 331 | 227 | 536 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1aso_B | 7.00649e-43 | 5 | 331 | 227 | 536 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY297248 | 309 | 1 | 302 | 0 |
| DW243722 | 282 | 23 | 297 | 0 |
| EX274037 | 313 | 15 | 318 | 0 |
| BQ966747 | 262 | 50 | 311 | 0 |
| FC900507 | 257 | 1 | 250 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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