Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10026471 |
Family | AA7 |
Protein Properties | Length: 539 Molecular Weight: 59938.9 Isoelectric Point: 6.0299 |
Chromosome | Chromosome/Scaffold: 380 Start: 962564 End: 965476 |
Description | cytokinin oxidase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 67 | 262 | 4.6e-29 |
SSNPLALIRPSGADDVARVLKSACRSSNLTVAARGNGHSINGQAMADGGIVLDMRSTEGNHFKILRINGGDHYADVSGGALWEDILMRCVSEYGLAPRSW TDYLRLTVGGTLSNAGVSGQAFRYGPQSSNVTELDVVTGKGDFLTCSPTQNSDLFFGALGGLGQFGVITRARIPLEPAPDMVRWIRMVYAEFEDFS |
Full Sequence |
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Protein Sequence Length: 539 Download |
MMIAYLELER FNIQENDSSE SRPDDDDHHV DKNQLLPVIG LLQSLDLQGS IDYSTLAAGK 60 DFGGVYSSNP LALIRPSGAD DVARVLKSAC RSSNLTVAAR GNGHSINGQA MADGGIVLDM 120 RSTEGNHFKI LRINGGDHYA DVSGGALWED ILMRCVSEYG LAPRSWTDYL RLTVGGTLSN 180 AGVSGQAFRY GPQSSNVTEL DVVTGKGDFL TCSPTQNSDL FFGALGGLGQ FGVITRARIP 240 LEPAPDMVRW IRMVYAEFED FSRDAEWLVT QPEKESFDYV EGFAFVNSDS PADGWPSVPL 300 NHMMTTPIHS GHQLLYCLEL ALHFNHSNSS STVDSVVKRL IGGLRYMKGF KYEVDLSYVE 360 FVMRVKRVEE DARAHGMWDA PHPWLNLFVS KADIAEFDRL IFKGLLHDGV GGPMLVYPLL 420 RSKWDSRSSV VLPEGEDEIF YIVALLRSNP PYPKGPSVDK LVSQNDKIIQ SCIQHGLGFK 480 LYLPHYQSQH DWRRHFGDQW SKFVQLKLAF DPMAVLAPGQ KIFTRTTKNS NMLHLSPQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01679 | bact_FAD_ox | 4.0e-8 | 60 | 296 | 245 | + FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. | ||
COG0277 | GlcD | 5.0e-26 | 63 | 525 | 473 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam01565 | FAD_binding_4 | 2.0e-30 | 70 | 213 | 144 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
pfam09265 | Cytokin-bind | 7.0e-122 | 245 | 523 | 283 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
PLN02441 | PLN02441 | 0 | 41 | 527 | 496 | + cytokinin dehydrogenase |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009690 | cytokinin metabolic process |
GO:0016491 | oxidoreductase activity |
GO:0019139 | cytokinin dehydrogenase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2EXR | 0 | 40 | 526 | 29 | 523 | A Chain A, X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE (CKX) From Arabidopsis Thaliana At5g21482 |
RefSeq | NP_850863.1 | 0 | 40 | 526 | 29 | 523 | CKX7 (CYTOKININ OXIDASE 7); cytokinin dehydrogenase/ oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002279960.1 | 0 | 2 | 528 | 1 | 514 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309468.1 | 0 | 2 | 528 | 1 | 520 | cytokinin oxidase [Populus trichocarpa] |
RefSeq | XP_002516133.1 | 0 | 2 | 529 | 1 | 520 | gulonolactone oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2q4w_A | 0 | 40 | 526 | 29 | 523 | A Chain A, Crystal Structure Of The S. Cerevisiae Dexh Helicase Ski2 Bound To Amppnp |
PDB | 2exr_A | 0 | 40 | 526 | 29 | 523 | A Chain A, X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE (CKX) FROM Arabidopsis Thaliana At5g21482 |
PDB | 3s1d_A | 0 | 42 | 523 | 20 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3s1c_A | 0 | 42 | 523 | 20 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3dq0_A | 0 | 42 | 523 | 20 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781924 | 527 | 2 | 523 | 0 |
JG174341 | 240 | 233 | 472 | 0 |
ES791244 | 405 | 99 | 494 | 0 |
CF514162 | 284 | 251 | 529 | 0 |
FC070877 | 297 | 44 | 334 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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