Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10026662 |
Family | CBM43 |
Protein Properties | Length: 239 Molecular Weight: 22688.8 Isoelectric Point: 4.8784 |
Chromosome | Chromosome/Scaffold: 617 Start: 868562 End: 870054 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 104 | 3e-30 |
CLCKDGVGELALQKALDYACGAGADCTAISQNGACFQPNTVKDHCSYAVNSYFQKKGQSSGSCEFNGAATPSTSPPTGVTSTC |
Full Sequence |
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Protein Sequence Length: 239 Download |
MAVLVFLAMF LALSGHSSAN YCLCKDGVGE LALQKALDYA CGAGADCTAI SQNGACFQPN 60 TVKDHCSYAV NSYFQKKGQS SGSCEFNGAA TPSTSPPTGV TSTCVFPASS GNAGTSPTTN 120 PGSSTPGTST GTGTSTGTGT GTSTGTGSTG TSTGTGTSSG NGTGGMGTGT GTGTGTSTGM 180 NPESSSTGTG TTPSVFGTGL GPTGSGTGMG DSSGSTSTTV DSTKLFILVV AGLMVLLV* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-18 | 21 | 90 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-26 | 21 | 90 | 70 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14053.1 | 0 | 1 | 115 | 1 | 114 | unknown [Glycine max] |
GenBank | ACU19899.1 | 0 | 1 | 118 | 1 | 117 | unknown [Glycine max] |
GenBank | ACU20773.1 | 0 | 1 | 115 | 1 | 114 | unknown [Glycine max] |
RefSeq | XP_002311337.1 | 0 | 1 | 159 | 1 | 158 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316090.1 | 0 | 1 | 110 | 1 | 110 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-16 | 21 | 110 | 13 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |