Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10026729 |
Family | CE8 |
Protein Properties | Length: 302 Molecular Weight: 31767.7 Isoelectric Point: 9.7223 |
Chromosome | Chromosome/Scaffold: 361 Start: 175907 End: 177897 |
Description | pectin methylesterase 61 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 10 | 281 | 0 |
GVIYVKAGTYKENLNFKTKQKNVVLVGDGKGKTVIVGSRNADDGSTTYDSATVAAMGDGFMARDLTIVNSAGPSKHQAVALRVGSDRAVIFRCSIQGYQD TLYTLSKRQFYRETDIYGTVDFIFGNSAVVFQNCNIYTRSGSRGDNFITAQGRTDPNQNTGISIHNCRIESDGSGAKTYLGRPWKEYSRTVVMQSVIGGH VRSVVMLGVIGGRPASAGWAPWSGGFALKTLYYAEYMNSGPGAGISGRVSWPGYKGAVGPLEAGKFTVGQLI |
Full Sequence |
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Protein Sequence Length: 302 Download |
MSDGGGGGSG VIYVKAGTYK ENLNFKTKQK NVVLVGDGKG KTVIVGSRNA DDGSTTYDSA 60 TVAAMGDGFM ARDLTIVNSA GPSKHQAVAL RVGSDRAVIF RCSIQGYQDT LYTLSKRQFY 120 RETDIYGTVD FIFGNSAVVF QNCNIYTRSG SRGDNFITAQ GRTDPNQNTG ISIHNCRIES 180 DGSGAKTYLG RPWKEYSRTV VMQSVIGGHV RSVVMLGVIG GRPASAGWAP WSGGFALKTL 240 YYAEYMNSGP GAGISGRVSW PGYKGAVGPL EAGKFTVGQL IGGNSWLPST GVSFDAGLIG 300 V* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 3.0e-126 | 11 | 298 | 296 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 3.0e-128 | 11 | 299 | 296 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-139 | 11 | 298 | 295 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-161 | 11 | 284 | 281 | + Pectinesterase. | ||
PLN02170 | PLN02170 | 4.0e-165 | 11 | 299 | 289 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK69695.1 | 0 | 11 | 301 | 274 | 551 | putative pectin methylesterase LuPME1 [Linum usitatissimum] |
EMBL | CBI39447.1 | 0 | 6 | 299 | 154 | 431 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181833.1 | 0 | 2 | 299 | 235 | 517 | ATPMEPCRD; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_191460.1 | 0 | 6 | 299 | 252 | 529 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002527752.1 | 0 | 5 | 300 | 301 | 583 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 11 | 298 | 34 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 11 | 298 | 38 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 6e-20 | 11 | 289 | 36 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-20 | 11 | 289 | 36 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-19 | 11 | 289 | 36 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FY433569 | 267 | 11 | 277 | 0 |
EG693733 | 263 | 38 | 300 | 0 |
EX334231 | 294 | 12 | 298 | 0 |
EX334448 | 290 | 12 | 294 | 0 |
CV886778 | 293 | 13 | 298 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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