Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10027204 |
Family | CE8 |
Protein Properties | Length: 681 Molecular Weight: 74955.1 Isoelectric Point: 9.9305 |
Chromosome | Chromosome/Scaffold: 472 Start: 266578 End: 280972 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 371 | 662 | 0 |
VVVAKDGSGKFKTVQAAIDWAAKRHNFKEKFVIRVKRGIYKENIKVLDSNHHVWLVGDGIGVTIITGGRSVGSGSYTTFRIDGAHFVARGITFRNTAGPT KRQAVALRSASDLAVFYRCSFQGYQDTLFIQTQRQFFRECHVSGTVDFIFGNAAAVFQNCMIFVRRPMVGQANIITAQGRLNSFEHTGISIHNSRIVPSP ELKPVSRKFRTYLGRPWMKYSRTVVMKSYLDGMVEPSGWSKWGNSDFGLSTLYFGEYKNFGPGASTKSRVRWKGFHVIGERVTAERFTVNGL |
Full Sequence |
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Protein Sequence Length: 681 Download |
MLDRGLPRHI IHPLPAPVLP GLLHPQHDRL HLRQRRRRLP ELRNLPPQAT PRPGEHDHRP 60 GAEQPIPEHG DLDPQLEDRT CPGPLTSGPD GEDVSRSSVD AICADGSSTR RDGESGGSIQ 120 MSGLRRTLGS IRISGQGFDP VAGPVARVSC DEVGPVKRQV KSSETGLITS WCSETPHPDA 180 CTHFVTRTQQ TSMAPSRRSL FRKMVIEAAL SKALDVEGQL VNLTSKCRNP RQSIVWSDCR 240 KLHANTIRHL NSTLQCLHGR VDDSAVETLC SDLDAQTWLS SALTNVETCR SGSTDLNVSD 300 FISPMIESSN LSELITNTLA VNGALLANNE ANEKVNVENH IHVSSSVDWG LGEKRKVLEG 360 SITSLHLKAS VVVAKDGSGK FKTVQAAIDW AAKRHNFKEK FVIRVKRGIY KENIKVLDSN 420 HHVWLVGDGI GVTIITGGRS VGSGSYTTFR IDGAHFVARG ITFRNTAGPT KRQAVALRSA 480 SDLAVFYRCS FQGYQDTLFI QTQRQFFREC HVSGTVDFIF GNAAAVFQNC MIFVRRPMVG 540 QANIITAQGR LNSFEHTGIS IHNSRIVPSP ELKPVSRKFR TYLGRPWMKY SRTVVMKSYL 600 DGMVEPSGWS KWGNSDFGLS TLYFGEYKNF GPGASTKSRV RWKGFHVIGE RVTAERFTVN 660 GLYAGRSWLP PTGVPFVAGL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 3.0e-120 | 172 | 680 | 521 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 2.0e-123 | 172 | 680 | 542 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 7.0e-132 | 162 | 680 | 525 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 5.0e-147 | 371 | 665 | 299 | + Pectinesterase. | ||
PLN02995 | PLN02995 | 6.0e-178 | 168 | 680 | 519 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_199962.1 | 0 | 169 | 680 | 35 | 536 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264861.1 | 0 | 166 | 680 | 28 | 523 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
RefSeq | XP_002318284.1 | 0 | 161 | 680 | 24 | 527 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322402.1 | 0 | 168 | 680 | 30 | 524 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510939.1 | 0 | 168 | 680 | 31 | 526 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 369 | 680 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 370 | 680 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 2e-24 | 370 | 635 | 5 | 312 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-24 | 370 | 635 | 5 | 312 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-24 | 370 | 635 | 5 | 312 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV273451 | 224 | 458 | 681 | 0 |
CX711539 | 229 | 451 | 679 | 0 |
EC939603 | 287 | 399 | 681 | 0 |
GT128444 | 217 | 465 | 681 | 0 |
CB970501 | 234 | 448 | 681 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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