Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10027205 |
Family | GH9 |
Protein Properties | Length: 493 Molecular Weight: 54419.5 Isoelectric Point: 6.5714 |
Chromosome | Chromosome/Scaffold: 472 Start: 285220 End: 287689 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 18 | 485 | 0 |
EYGDALSKCILFFEGQRSGKLPSNQRMTWRRDSGLRDGFEIGVDLVGGYYDAGDNVKFNFPMAFTTTMLAWSVVEFGTMMGPVEKQHALEAIRWGTDYLL KATSVPGFVFAQVGDPYADHNCWERPEDMDTRRTPYAVSKNFPGSEVSGEISAALAASSVAFRGVDRMYSAKLLSRASTVFKFADTYRGSYNASIGDWAC PFYCDFSGYEDELVWAAAWMFKATKAEYYQSYVVKNSGELDKMELKGIDGFTYSGGTYGEFGWDTKTAGINVLVAGMLTPSNVTQTTSFGPNADRFVCSI LPESPTVAVQYSPGGLLFKPGGSNMQHVTALSFLFIAYGRHLQRYKRVVHCGDVVVEHDRLYNFARTQVDYLLGTNPLKMSYMVGYGPKFPQRIHHRASS LPSIEKHRERIDCQGGTSYFMSPNPNPNQLTGAIVGGPDIHDAYDDSRADFVHSEPTTYINAPLVGVL |
Full Sequence |
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Protein Sequence Length: 493 Download |
MAMAAMMMVV GSVTASHEYG DALSKCILFF EGQRSGKLPS NQRMTWRRDS GLRDGFEIGV 60 DLVGGYYDAG DNVKFNFPMA FTTTMLAWSV VEFGTMMGPV EKQHALEAIR WGTDYLLKAT 120 SVPGFVFAQV GDPYADHNCW ERPEDMDTRR TPYAVSKNFP GSEVSGEISA ALAASSVAFR 180 GVDRMYSAKL LSRASTVFKF ADTYRGSYNA SIGDWACPFY CDFSGYEDEL VWAAAWMFKA 240 TKAEYYQSYV VKNSGELDKM ELKGIDGFTY SGGTYGEFGW DTKTAGINVL VAGMLTPSNV 300 TQTTSFGPNA DRFVCSILPE SPTVAVQYSP GGLLFKPGGS NMQHVTALSF LFIAYGRHLQ 360 RYKRVVHCGD VVVEHDRLYN FARTQVDYLL GTNPLKMSYM VGYGPKFPQR IHHRASSLPS 420 IEKHRERIDC QGGTSYFMSP NPNPNQLTGA IVGGPDIHDA YDDSRADFVH SEPTTYINAP 480 LVGVLGYFKS HP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 0 | 12 | 492 | 481 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 15 | 488 | 474 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 14 | 492 | 481 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 0 | 19 | 486 | 471 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 16 | 483 | 471 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC95009.1 | 0 | 13 | 491 | 30 | 495 | endo-1,4-beta-glucanase precursor [Fragaria x ananassa] |
RefSeq | XP_002321833.1 | 0 | 8 | 492 | 1 | 484 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321834.1 | 0 | 1 | 490 | 7 | 488 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510937.1 | 0 | 5 | 492 | 9 | 500 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002510938.1 | 0 | 6 | 492 | 16 | 501 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 16 | 485 | 2 | 425 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1ksc_A | 0 | 16 | 485 | 2 | 425 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1ks8_A | 0 | 16 | 485 | 2 | 425 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 19 | 485 | 6 | 437 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 19 | 485 | 6 | 437 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO788388 | 413 | 82 | 491 | 0 |
DY298091 | 338 | 18 | 355 | 0 |
DR913043 | 269 | 13 | 281 | 0 |
DT762304 | 282 | 211 | 492 | 0 |
DR913267 | 263 | 17 | 279 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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