Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10027206 |
Family | CE8 |
Protein Properties | Length: 507 Molecular Weight: 55429.3 Isoelectric Point: 6.8409 |
Chromosome | Chromosome/Scaffold: 472 Start: 288465 End: 290290 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 197 | 490 | 0 |
LVVAKDGSGNFRTVKEAVAAAEARQRSGRFVIKIKSGIYEENVEIGNKLKNIMLIGDGMKSTVITGSRSVGGGSTTFNSATIVVTGEGFIAKEITFRNTA GPQNGQAVALRSGADLSAFYRCSFEAYQDTLYVHSNRQFYKECSVSGTVDFIFGNAAAVLQNCYLYARRPMSGQGIMVTAQGRTDPNQNTGISVHNSLVE ASPDLEPVIGSFKTYLGRPWKEYSRTVFMQTYLGSLVQPAGWSPWDGDFALKTLYYGEYKNTGPGAPTGNRVKWARVITSADEAVRFSVGNFIA |
Full Sequence |
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Protein Sequence Length: 507 Download |
MALSSGNDLE WWCDQTPYPN PCKRLMIRPN MHSGHSFAGC SIYYAEFRRR MIKLAMDQTN 60 TAMAHNINLD TKSHHEKELA TLADCLTLYD DVVFHLNKTL TNTKHTNFDV QTWLSTALTD 120 LDTCQNGFWE LGLSNSSLLP GNHDDISKML SNALAISNYD SGNNVDILSV DQDGFPSWLT 180 AGDRRLLQSG AELTADLVVA KDGSGNFRTV KEAVAAAEAR QRSGRFVIKI KSGIYEENVE 240 IGNKLKNIML IGDGMKSTVI TGSRSVGGGS TTFNSATIVV TGEGFIAKEI TFRNTAGPQN 300 GQAVALRSGA DLSAFYRCSF EAYQDTLYVH SNRQFYKECS VSGTVDFIFG NAAAVLQNCY 360 LYARRPMSGQ GIMVTAQGRT DPNQNTGISV HNSLVEASPD LEPVIGSFKT YLGRPWKEYS 420 RTVFMQTYLG SLVQPAGWSP WDGDFALKTL YYGEYKNTGP GAPTGNRVKW ARVITSADEA 480 VRFSVGNFIA GQSWIPGTGI PFTAGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 6.0e-150 | 13 | 506 | 516 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 5.0e-154 | 109 | 506 | 434 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02995 | PLN02995 | 3.0e-170 | 1 | 506 | 521 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 7.0e-172 | 58 | 506 | 456 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 196 | 491 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002265104.1 | 0 | 13 | 506 | 8 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318285.1 | 0 | 7 | 506 | 29 | 520 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322401.1 | 0 | 2 | 506 | 21 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510940.1 | 0 | 52 | 506 | 3 | 455 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002511679.1 | 0 | 8 | 506 | 27 | 514 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 196 | 506 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 193 | 506 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 4e-24 | 194 | 462 | 3 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-24 | 194 | 462 | 3 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-24 | 194 | 462 | 3 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778758 | 445 | 78 | 506 | 0 |
DT740901 | 283 | 227 | 507 | 0 |
EH672663 | 270 | 213 | 480 | 0 |
DY976907 | 272 | 195 | 465 | 0 |
HO852920 | 408 | 109 | 507 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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