| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10027276 |
| Family | GH51 |
| Protein Properties | Length: 656 Molecular Weight: 71590.7 Isoelectric Point: 5.6906 |
| Chromosome | Chromosome/Scaffold: 472 Start: 589601 End: 593736 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 204 | 631 | 0 |
| KGVIWFDQVSLMPEDTYKGHGFRTELFEMLQEIKPRFLRFPGGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDDGLGYYEFLQLAEDLDTLPI WVFNNGISHQDQVDTASILPFVQEALDGLEFALGDAGSKWGSVRAAMGHPAPFNLKYVAIGNEDCGKKNYRGNYLKFYEAIKRDYPGIQMISNCDGSVNP LDHPAEFYDFHVYTSASNLFSMSHQFDRTSRSGPKAFVSEYAVTGKDAGTGSLLAALAEAAFLIGVEKNSDIVEMASYAPLFVNTNDRRWNPDAIVFNAS KAYGTPSYWMQRFFAESSGSYLLNSTLQTTSSSSLVASAISWQDSKDSSTYIRIKVVNFASSTVNLKISVSGLGVNSVGVSGSTKTVLTSANVMDENSFQ QTNKVAPTQSQLQNAGKDMDVQLSPNSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 656 Download |
| MAAAASSSYL LCCFIAAIAV CLVTPSLVDG ALEANLTAKL SVDASVRRTI PSTLFGIFFE 60 EINHAGAGGL WAELVSNRGF EAGGANIPSN IDPWTTLRNK IALRLDVLCD VKSCPAGGVG 120 VYNPGYWGMN IVKGKKYKLV LYVRSFDAID VSVSLTGSSG ALTLSTTSIK AFASDVSNWT 180 KVEGLLEAKE SDQSARLELR TSTKGVIWFD QVSLMPEDTY KGHGFRTELF EMLQEIKPRF 240 LRFPGGCFVE GEWLRNAFRW KESIGPWEER PGHFGDVWMY WTDDGLGYYE FLQLAEDLDT 300 LPIWVFNNGI SHQDQVDTAS ILPFVQEALD GLEFALGDAG SKWGSVRAAM GHPAPFNLKY 360 VAIGNEDCGK KNYRGNYLKF YEAIKRDYPG IQMISNCDGS VNPLDHPAEF YDFHVYTSAS 420 NLFSMSHQFD RTSRSGPKAF VSEYAVTGKD AGTGSLLAAL AEAAFLIGVE KNSDIVEMAS 480 YAPLFVNTND RRWNPDAIVF NASKAYGTPS YWMQRFFAES SGSYLLNSTL QTTSSSSLVA 540 SAISWQDSKD SSTYIRIKVV NFASSTVNLK ISVSGLGVNS VGVSGSTKTV LTSANVMDEN 600 SFQQTNKVAP TQSQLQNAGK DMDVQLSPNS ITSFDLLTHS HSIRTRKAGP FARVS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 8.0e-19 | 442 | 630 | 202 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 2.0e-26 | 442 | 630 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 2.0e-30 | 224 | 371 | 153 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 31 | 648 | 27 | 667 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABF22680.3 | 0 | 21 | 648 | 18 | 669 | alpha-L-arabinofuranosidase [Prunus persica] |
| GenBank | ABV32544.1 | 0 | 21 | 648 | 18 | 669 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| RefSeq | XP_002307940.1 | 0 | 5 | 655 | 6 | 669 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 32 | 655 | 34 | 677 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 1e-17 | 224 | 615 | 48 | 461 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 1e-17 | 224 | 615 | 48 | 461 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 1e-17 | 224 | 615 | 48 | 461 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 1e-17 | 224 | 615 | 48 | 461 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 1e-17 | 224 | 615 | 48 | 461 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
