| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10027329 |
| Family | GH5 |
| Protein Properties | Length: 447 Molecular Weight: 50381.2 Isoelectric Point: 5.9238 |
| Chromosome | Chromosome/Scaffold: 472 Start: 788916 End: 790835 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 66 | 389 | 7.4e-31 |
| PPYFYVNGWNSYWLLQESIWSSSRPRVSKVLKAGAELGLTVCRTWAFSDGDGPDALQIAPGVFNERVFKGLDYVIVEARRHGIRLILSLVNNLDAFGGKD QYVKWGQQAGINVSSSDDSFFANPAIRDYYKAYIKKIVTRKNSLSRVKYSDEPAIFAWELMNEPRCASRTCAPVLQAWISEMTSYLKSLDRRHLVTVGLE GFYGLKAANKSEVNPGEWAASLGSDFIENSAVRDIDFASVHSYPDSWMQNADLETKVKYLSRWVDSHISDGDSLLKKPVLFTEVGSVEKEGGNDRDVLLK IVYDNIYESAKKKEAGGGALIWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 447 Download |
| MDLREWRERR LYPLVGGLIL LFLLYVSFFG DDLAFPSVVW QPKMGFVATD TTHFVIVDGK 60 DRKSTPPYFY VNGWNSYWLL QESIWSSSRP RVSKVLKAGA ELGLTVCRTW AFSDGDGPDA 120 LQIAPGVFNE RVFKGLDYVI VEARRHGIRL ILSLVNNLDA FGGKDQYVKW GQQAGINVSS 180 SDDSFFANPA IRDYYKAYIK KIVTRKNSLS RVKYSDEPAI FAWELMNEPR CASRTCAPVL 240 QAWISEMTSY LKSLDRRHLV TVGLEGFYGL KAANKSEVNP GEWAASLGSD FIENSAVRDI 300 DFASVHSYPD SWMQNADLET KVKYLSRWVD SHISDGDSLL KKPVLFTEVG SVEKEGGNDR 360 DVLLKIVYDN IYESAKKKEA GGGALIWQLL VEGVEQYSDQ FSFVPWHYPT TAKLIKEQSC 420 RLLHNVSGEE AEGKPLNDED VCFGLH* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 0.005 | 165 | 359 | 206 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 6.0e-21 | 95 | 389 | 298 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77937.1 | 0 | 5 | 444 | 4 | 443 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI33116.1 | 0 | 5 | 444 | 4 | 441 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272403.1 | 0 | 5 | 444 | 4 | 443 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307872.1 | 0 | 44 | 435 | 1 | 394 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520563.1 | 0 | 5 | 422 | 4 | 422 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 46 | 422 | 6 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 88 | 405 | 41 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 88 | 405 | 41 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 88 | 405 | 41 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 88 | 405 | 41 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
