Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10027707 |
Family | GT47 |
Protein Properties | Length: 467 Molecular Weight: 53501.2 Isoelectric Point: 8.7835 |
Chromosome | Chromosome/Scaffold: 2 Start: 1050930 End: 1054234 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 136 | 416 | 0 |
KRFKIWTYKEGEKPLVHVGPMKNIYSIEGQFIDELERGNTPFAAQNPEEAHVFFLPVSIANIVKFVYSSGYDLHFLLNIFKDYVHVSSIKYPYWNRTSGA DHFMLSCHDWAPELPKYDYDTYKNIIRVLCNANMSEGFHPVRDVSLPELKTPPDRLTPSILRNSPENRDTLAFFAGGSHGYIREVLLDHWKDKDDEVRVH EYLKKGENYMKLMSESKFCLCPSGYEVASPRLVEAMFAGCVPVLLSANYSLPFSEVLDWSRFSVQIPVEKIPELKTILKNI |
Full Sequence |
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Protein Sequence Length: 467 Download |
MQLMGNLRNC SSHCSSSYTL LPLICSTLLL LLLLYHQPTT SSSSSSSSSI SSFSSSSNPT 60 TNNNITHHSP PPKEAIEKKS NGLERIEAQL GTARKAINEA IRTRNYTSDE QETFIPRGNI 120 YRNAYAFHQS HIEMRKRFKI WTYKEGEKPL VHVGPMKNIY SIEGQFIDEL ERGNTPFAAQ 180 NPEEAHVFFL PVSIANIVKF VYSSGYDLHF LLNIFKDYVH VSSIKYPYWN RTSGADHFML 240 SCHDWAPELP KYDYDTYKNI IRVLCNANMS EGFHPVRDVS LPELKTPPDR LTPSILRNSP 300 ENRDTLAFFA GGSHGYIREV LLDHWKDKDD EVRVHEYLKK GENYMKLMSE SKFCLCPSGY 360 EVASPRLVEA MFAGCVPVLL SANYSLPFSE VLDWSRFSVQ IPVEKIPELK TILKNIGDAK 420 YLKLQRNVVK VRRHFELNRP SKPFDVLHMV IHSIWLRRLN IRLPAH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-66 | 134 | 416 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25537.1 | 0 | 78 | 464 | 83 | 476 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197526.4 | 0 | 60 | 464 | 5 | 408 | catalytic [Arabidopsis thaliana] |
Swiss-Prot | Q3E9A4 | 0 | 39 | 464 | 46 | 466 | GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260 |
RefSeq | XP_002263848.1 | 0 | 78 | 464 | 2 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002531945.1 | 0 | 15 | 464 | 8 | 451 | catalytic, putative [Ricinus communis] |