Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10027737 |
Family | CE8 |
Protein Properties | Length: 418 Molecular Weight: 45826.9 Isoelectric Point: 5.8592 |
Chromosome | Chromosome/Scaffold: 1143 Start: 156345 End: 158794 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 91 | 381 | 0 |
TVGQRGCANFSSVQKAVDASPDFGSNTTLILIDSGTYREKVVVNANKTNLVLEGQNYLNTAIEWNDTANSTGGTIYSASVVVYAPSFTAYNISFKNSAPA PAPGEVGAQAVAIRVAGDQAAFYRCGFYGAQDTLHDDHGRHYYRGCFIQGSIDFIFGNAKSLFESCTINSIAIPPTTDSGATGSITAQARQSSGEDTGFS FVNSKINGTGQVWLGRAWGTYSTVVFIRTYMSDAVSPDGWNDWRDPSRDQTVLFGEYDCYGPGANNSSRVSYGRRLTQEEAASFMDISYIN |
Full Sequence |
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Protein Sequence Length: 418 Download |
MKLLNQTPTF WLFASSSFIA LISLLCLIPP PLDLPSSYLS TTFPDGFLQF GSFLPTSKHH 60 HHHRRRPKVK CEENKWRSKL IYLYQVSLVL TVGQRGCANF SSVQKAVDAS PDFGSNTTLI 120 LIDSGTYREK VVVNANKTNL VLEGQNYLNT AIEWNDTANS TGGTIYSASV VVYAPSFTAY 180 NISFKNSAPA PAPGEVGAQA VAIRVAGDQA AFYRCGFYGA QDTLHDDHGR HYYRGCFIQG 240 SIDFIFGNAK SLFESCTINS IAIPPTTDSG ATGSITAQAR QSSGEDTGFS FVNSKINGTG 300 QVWLGRAWGT YSTVVFIRTY MSDAVSPDGW NDWRDPSRDQ TVLFGEYDCY GPGANNSSRV 360 SYGRRLTQEE AASFMDISYI NGEQWLQDGR TVPRVPDYND GDGCGNYIWG NGDVDQE* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 1.0e-98 | 87 | 387 | 302 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 8.0e-100 | 88 | 386 | 306 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-103 | 89 | 386 | 299 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 3.0e-121 | 86 | 387 | 309 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 1.0e-140 | 89 | 387 | 300 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30191.1 | 0 | 65 | 386 | 80 | 399 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181209.1 | 0 | 69 | 402 | 71 | 401 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 89 | 386 | 14 | 309 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 74 | 408 | 2 | 334 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519425.1 | 0 | 67 | 388 | 75 | 369 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.94273e-44 | 90 | 387 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-38 | 91 | 387 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-20 | 100 | 374 | 44 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 2e-17 | 100 | 374 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 2e-17 | 100 | 374 | 18 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |