| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10027844 |
| Family | GH35 |
| Protein Properties | Length: 834 Molecular Weight: 93226.5 Isoelectric Point: 7.4203 |
| Chromosome | Chromosome/Scaffold: 1143 Start: 622256 End: 627725 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 42 | 346 | 0 |
| LIIHGKRELLFSGSIHYPRSTPDMWPKLLEDAKRGGINVIQTYTFWNIHEPDEGKFNFEGRFDVIKFLKMCGDHGLYVTIRFGPFIQGEWNHGALPYWLR EIPNIIFRCYNEPYMQHMERFVTMMVQKMKDAKLFAGQGGPIILAQIENEYNTVQLAYRELGDKYVQWAGNFAESLKVGVPWVMCKQRDAPDPVINACNG RHCGDTFPGPNKPNKPALWTENWTAQFRVFGDPPSQRSAEDTAFGVVRWFSKNGSLVNYYMYHGGTNLGRTAASFVTTRYYDEAPLDEFGLDRGPKFGHL KDVHK | |||
| Full Sequence |
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| Protein Sequence Length: 834 Download |
| MAASVAAFLV AVFLILSPPV VVNAHDDNKE ELNGVTYDAK SLIIHGKREL LFSGSIHYPR 60 STPDMWPKLL EDAKRGGINV IQTYTFWNIH EPDEGKFNFE GRFDVIKFLK MCGDHGLYVT 120 IRFGPFIQGE WNHGALPYWL REIPNIIFRC YNEPYMQHME RFVTMMVQKM KDAKLFAGQG 180 GPIILAQIEN EYNTVQLAYR ELGDKYVQWA GNFAESLKVG VPWVMCKQRD APDPVINACN 240 GRHCGDTFPG PNKPNKPALW TENWTAQFRV FGDPPSQRSA EDTAFGVVRW FSKNGSLVNY 300 YMYHGGTNLG RTAASFVTTR YYDEAPLDEF GLDRGPKFGH LKDVHKALNL CKRALLWGTS 360 TTSQRLNPDV EVRIYETPGT DVCSAFLTNN HTRNTHTVNF KGHDYYLPAR SISILPDCKT 420 VVLNTATIVA QHNSRNFYRS EVTNKLCWKM TTETIPSVLN VTSSTPMELY FLTKDKTDYA 480 WYTTTINLDP RDLSMKKDVL PVLRVASLGH AMLAFVNGVF IGSAHGSQID KSFVLQKSIE 540 LKPGINHISL LGTLIGLPDS GAYMEHRFAG PRGVSILGLN TGTLDLSLNG WGHQVGLAGE 600 ANEWFNEDGS KKGKWSDVPK GSKGCALTWY KTKFDAPERD DPVAVSMYGM IKGMIWVNGE 660 CIGRYWMSYV SPLGDPTQVE YHIPRSYLKP KDNLMVVLEE EPANPANITI LTVNRDTICS 720 DVSELSPPSV RQWERKDDKF RPVGEEVRLG AHLRCPFGKK IVVVDFASYG DPYGACGGFA 780 LGTCNSPVSK QVVEEHCLGK DVCDVPMDKG LFEKSGDPCP QVHKTLAVQV TCK* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 9.0e-8 | 63 | 192 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 2.0e-17 | 753 | 832 | 83 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 1.0e-18 | 35 | 192 | 169 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-140 | 41 | 348 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 35 | 832 | 827 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS76480.1 | 0 | 34 | 832 | 48 | 842 | beta-galactosidase [Gossypium hirsutum] |
| GenBank | ACC60982.1 | 0 | 30 | 832 | 23 | 826 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| RefSeq | XP_002278545.1 | 0 | 1 | 832 | 1 | 829 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 22 | 832 | 21 | 826 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 34 | 832 | 30 | 825 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-35 | 41 | 344 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.002 | 628 | 699 | 509 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 5e-33 | 35 | 344 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 5e-33 | 35 | 344 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
