y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10027969 |
Family | CE10 |
Protein Properties | Length: 355 Molecular Weight: 39813.3 Isoelectric Point: 7.9585 |
Chromosome | Chromosome/Scaffold: 132 Start: 100782 End: 102148 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 59 | 338 | 0 |
PVDGVFSFDHVDRSTGLLNRVYRPTPELDHNTTTQLSPSVAAVIDLEKPLSTTTIVPVIVFFHGGSFTHSSANSAIYDSFCRRLVSICGAVVVSVNYRRS PEHRYPCAYDDGWSALKWVKSRSWLRSGKDSKVHVFLAGDSSGGNIAHHVAVRAAESDIEILGNILLHPMFGGQERTESERCLDGKYFVTIQDRDWYWRA FLPEGEDRDHPAVNIFGPRSKKLDGGIKLPKSLVVVAGLDLIQDWQLAYVDGMEKAGHQVKLIFLKQATIGFYFLPNNQH |
Full Sequence |
---|
Protein Sequence Length: 355 Download |
MAGSNEVNLN ESKRVVPLNT WVLISNFKLA YNLLRRPDGS FNRDLAEFLD RKVPANTIPV 60 DGVFSFDHVD RSTGLLNRVY RPTPELDHNT TTQLSPSVAA VIDLEKPLST TTIVPVIVFF 120 HGGSFTHSSA NSAIYDSFCR RLVSICGAVV VSVNYRRSPE HRYPCAYDDG WSALKWVKSR 180 SWLRSGKDSK VHVFLAGDSS GGNIAHHVAV RAAESDIEIL GNILLHPMFG GQERTESERC 240 LDGKYFVTIQ DRDWYWRAFL PEGEDRDHPA VNIFGPRSKK LDGGIKLPKS LVVVAGLDLI 300 QDWQLAYVDG MEKAGHQVKL IFLKQATIGF YFLPNNQHFY CLMEEIKNFV KPSN* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.0002 | 115 | 156 | 45 | + Carboxylesterase family. | ||
COG2272 | PnbA | 1.0e-6 | 115 | 205 | 104 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 2.0e-12 | 116 | 307 | 197 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 1.0e-37 | 115 | 334 | 222 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 8.0e-73 | 117 | 332 | 217 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG89394.1 | 0 | 1 | 353 | 1 | 343 | gibberellic acid receptor [Gossypium hirsutum] |
GenBank | ACN86356.1 | 0 | 1 | 353 | 1 | 343 | GID1-1 [Gossypium hirsutum] |
RefSeq | XP_002302813.1 | 0 | 1 | 350 | 1 | 340 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320380.1 | 0 | 1 | 350 | 1 | 340 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524767.1 | 0 | 1 | 353 | 1 | 343 | Gibberellin receptor GID1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 1 | 350 | 8 | 348 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 2zsh_A | 0 | 1 | 350 | 8 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 2 | 350 | 1 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 2 | 350 | 1 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 2 | 350 | 1 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO779605 | 350 | 1 | 350 | 0 |
DT574934 | 331 | 19 | 349 | 0 |
HO795605 | 352 | 2 | 352 | 0 |
JG215142 | 261 | 1 | 260 | 0 |
ES790010 | 356 | 1 | 355 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|