| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10028127 |
| Family | GH47 |
| Protein Properties | Length: 405 Molecular Weight: 45779.3 Isoelectric Point: 5.3084 |
| Chromosome | Chromosome/Scaffold: 327 Start: 83534 End: 85953 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 9 | 401 | 0 |
| VYLDTAKDLADRLLLAFTSSSTPIPFSDVILHDPSAHRAPDGLSSTSEVSTLQLEFNYLSTLSGDPKYSMVAMKVLEHMKDLQKVDGLVPIYYLHKVWVS LLSFLPSFLPSCPDSGQFSGENIRLGSRGDSYYEYLIKVWLQQGRNRDTKFTYLHDMYTEAMKGVRHRLVKKSIPNGLVFVGELPYVPNGAFSPKMDHLV CFLPGTLALGATKGFTKEKATNENLMTFEDFENLKLAEDLAKTCFEMYSVTSTGLAPEIVYFHTEEYSEDGLGGGNKSSEYIDDIIIKPLDRHNLLRPET VESLFVLYRITEDPKYREWGWQIFEAFEKYTKVDSGGYSSLDDVTNLPPRRRDKMETFFLGETLKYLYLLFGDSSVIPLDKFVFNTEAHPFPI | |||
| Full Sequence |
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| Protein Sequence Length: 405 Download |
| MGKGPNPVVY LDTAKDLADR LLLAFTSSST PIPFSDVILH DPSAHRAPDG LSSTSEVSTL 60 QLEFNYLSTL SGDPKYSMVA MKVLEHMKDL QKVDGLVPIY YLHKVWVSLL SFLPSFLPSC 120 PDSGQFSGEN IRLGSRGDSY YEYLIKVWLQ QGRNRDTKFT YLHDMYTEAM KGVRHRLVKK 180 SIPNGLVFVG ELPYVPNGAF SPKMDHLVCF LPGTLALGAT KGFTKEKATN ENLMTFEDFE 240 NLKLAEDLAK TCFEMYSVTS TGLAPEIVYF HTEEYSEDGL GGGNKSSEYI DDIIIKPLDR 300 HNLLRPETVE SLFVLYRITE DPKYREWGWQ IFEAFEKYTK VDSGGYSSLD DVTNLPPRRR 360 DKMETFFLGE TLKYLYLLFG DSSVIPLDKF VFNTEAHPFP IKGM* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 2.0e-131 | 9 | 401 | 396 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 4.0e-151 | 9 | 401 | 396 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52061.1 | 0 | 4 | 402 | 178 | 558 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
| EMBL | CBI30870.1 | 0 | 4 | 404 | 62 | 444 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002275664.1 | 0 | 4 | 404 | 253 | 635 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
| RefSeq | XP_002306001.1 | 0 | 3 | 403 | 248 | 630 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519694.1 | 0 | 1 | 403 | 237 | 621 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1dl2_A | 0 | 6 | 401 | 122 | 494 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
| PDB | 1fmi_A | 0 | 9 | 401 | 111 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 9 | 401 | 111 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 9 | 401 | 111 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1g6i_A | 0 | 6 | 401 | 156 | 528 | A Chain A, Crystal Structure Of The Yeast Alpha-1,2-Mannosidase With Bound 1- Deoxymannojirimycin At 1.59 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO845862 | 356 | 27 | 382 | 0 |
| EX266875 | 370 | 3 | 369 | 0 |
| EX132736 | 314 | 37 | 350 | 0 |
| EX028015 | 307 | 80 | 386 | 0 |
| JG451037 | 272 | 121 | 392 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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