y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10028242 |
Family | CBM22 |
Protein Properties | Length: 776 Molecular Weight: 86785.3 Isoelectric Point: 6.4789 |
Chromosome | Chromosome/Scaffold: 327 Start: 788155 End: 790929 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 61 | 197 | 5.7e-26 |
NIILNPRFEEGLKNWSAKGCRIEVHESMGDGKIVPQLGKLFVSATQRTATWNGIEQEITGRVQREVPYAVTAVARIYGNNVSAATLQLTLWVQEQDLREQ YVAICSLQATDKDWMQLHGEFLLNSLPSRAIIFIEGP | |||
CBM22 | 232 | 374 | 1e-39 |
NVIENSNLEDGTSSSWFALGNCSLSVESGSPYILPPMAKDSLRSHDSLSGKYLRVTNRSQSWMGPAQIVTDKLTVYLTYQVSAWVRIGPGATGSQIVNAA LGVDGDWINGGEVEVNDGNWHEIGGTFRLEKQPSNVMVYVQGP | |||
GH10 | 428 | 711 | 0 |
VKQTQNSFPLGSCITRTSLDNDKFVNFLLDNFNWVVFENEMKWSWTEPQQGKFNYKEADDMLEFCRTHNLKVRGHCIFWEVESRIQPWVRSLNETSLKNA VQNRLNDLLTRYKGKPNHYDVNNEMLHGSFYQDRLGYDIRADMFRTAHQLDPSATLFVNDYHIEDGNDVHSTPEMYTRQVLDLREQGAEIGGIGVQGHIE VPVGTIVSSAFDKLGTLGLPIWVTELDVSSVNEFIRADDLEVILREAFAHPAVEGVVLWGFWELYMSRKNAHLVDASGEINQAG |
Full Sequence |
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Protein Sequence Length: 776 Download |
MAKHLAFSAS IALSLMFPFL LPNLTASASY VDGRSILGPY SRHHHHQAKH AGVGAAVNDD 60 NIILNPRFEE GLKNWSAKGC RIEVHESMGD GKIVPQLGKL FVSATQRTAT WNGIEQEITG 120 RVQREVPYAV TAVARIYGNN VSAATLQLTL WVQEQDLREQ YVAICSLQAT DKDWMQLHGE 180 FLLNSLPSRA IIFIEGPPAG TDILINSLIV QHAPKMPSSP RPVFQDPPFF MNVIENSNLE 240 DGTSSSWFAL GNCSLSVESG SPYILPPMAK DSLRSHDSLS GKYLRVTNRS QSWMGPAQIV 300 TDKLTVYLTY QVSAWVRIGP GATGSQIVNA ALGVDGDWIN GGEVEVNDGN WHEIGGTFRL 360 EKQPSNVMVY VQGPASGVDL MVAGFQIFAV NREARYSYLK KQTDKIRKRD VVLKFPAAGL 420 NNISYIKVKQ TQNSFPLGSC ITRTSLDNDK FVNFLLDNFN WVVFENEMKW SWTEPQQGKF 480 NYKEADDMLE FCRTHNLKVR GHCIFWEVES RIQPWVRSLN ETSLKNAVQN RLNDLLTRYK 540 GKPNHYDVNN EMLHGSFYQD RLGYDIRADM FRTAHQLDPS ATLFVNDYHI EDGNDVHSTP 600 EMYTRQVLDL REQGAEIGGI GVQGHIEVPV GTIVSSAFDK LGTLGLPIWV TELDVSSVNE 660 FIRADDLEVI LREAFAHPAV EGVVLWGFWE LYMSRKNAHL VDASGEINQA GKRFLSLKKE 720 WLSEAKGSIN DKGEFRFRGF HGTYDVQIVS STTQTINKTF VVDKGHSPLV VPIDL* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 2.0e-11 | 61 | 201 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 5.0e-16 | 232 | 377 | 154 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 4.0e-42 | 459 | 688 | 251 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
smart00633 | Glyco_10 | 6.0e-78 | 468 | 714 | 268 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 5.0e-78 | 433 | 718 | 306 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283550.1 | 0 | 55 | 775 | 261 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283550.1 | 3e-33 | 61 | 440 | 94 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 59 | 775 | 333 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 60 | 382 | 1 | 309 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510024.1 | 0 | 56 | 775 | 108 | 827 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 3e-31 | 437 | 687 | 18 | 268 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 1i1w_A | 3e-31 | 437 | 687 | 18 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 8e-31 | 437 | 687 | 18 | 268 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1nq6_A | 3e-30 | 437 | 709 | 15 | 291 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1ta3_B | 3e-30 | 437 | 687 | 17 | 269 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |