Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10028258 |
Family | GH17 |
Protein Properties | Length: 397 Molecular Weight: 43398.1 Isoelectric Point: 6.743 |
Chromosome | Chromosome/Scaffold: 327 Start: 901241 End: 902431 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 62 | 368 | 0 |
NQEHPEAIASTVTDLNFGAVRLPHPDPNLIRAFGFTDITVLLSIPNVLIPSLASNRTLAQRWIYVHVLPFFPRTKIAIISVGVDALPELNLLLSAIQNVH LALRDLGIKKISVSTTFSFVNLVTTAFPPSSATFKETIGGILMRPLLQFLEDTNSSLLVNLYPYNVYRMHSQIPLGFALFQEHNFNFRDDVVTGVRYRNL FDMMVDSVVTSMAVVGHENVPVIIAETGWPSSGGEGPFEADANPAYAELYLRSLVAHLVTGRGTPLRKEGVSQVYIYELVDQEVHEQGTRNWGVLYPNMS RKYHFDF |
Full Sequence |
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Protein Sequence Length: 397 Download |
MDALRLSFYT VPLLLLCLSF IHPLSLTAPP SASVIGVTYT PPITSSSSTG AGNASQPLPP 60 QNQEHPEAIA STVTDLNFGA VRLPHPDPNL IRAFGFTDIT VLLSIPNVLI PSLASNRTLA 120 QRWIYVHVLP FFPRTKIAII SVGVDALPEL NLLLSAIQNV HLALRDLGIK KISVSTTFSF 180 VNLVTTAFPP SSATFKETIG GILMRPLLQF LEDTNSSLLV NLYPYNVYRM HSQIPLGFAL 240 FQEHNFNFRD DVVTGVRYRN LFDMMVDSVV TSMAVVGHEN VPVIIAETGW PSSGGEGPFE 300 ADANPAYAEL YLRSLVAHLV TGRGTPLRKE GVSQVYIYEL VDQEVHEQGT RNWGVLYPNM 360 SRKYHFDFSS GTTSITISKG KLLLLGIASF ILLCSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3914 | Spy | 0.008 | 110 | 295 | 197 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
COG5309 | COG5309 | 0.0007 | 280 | 359 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-63 | 77 | 368 | 298 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN71832.1 | 0 | 34 | 322 | 31 | 307 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_191137.1 | 0 | 35 | 386 | 31 | 368 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002276218.1 | 0 | 42 | 386 | 23 | 372 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316237.1 | 0 | 67 | 393 | 62 | 392 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530412.1 | 0 | 22 | 390 | 26 | 381 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 9.99995e-41 | 70 | 368 | 15 | 306 | B Chain B, Lip5-chmp5 |
PDB | 1aq0_B | 9.99995e-41 | 70 | 368 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 9.99995e-41 | 70 | 368 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 1e-39 | 58 | 368 | 12 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 1e-34 | 77 | 369 | 28 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |