Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10028348 |
Family | GH35 |
Protein Properties | Length: 803 Molecular Weight: 89416.6 Isoelectric Point: 6.86 |
Chromosome | Chromosome/Scaffold: 413 Start: 230422 End: 234401 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 342 | 0 |
VINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGVDGIETYVFWNVHEPTPGNWNFEGRNDLVRFIKTIQRAGLYAHLRIGPYVCAEWNFGGFPVWLKY VPGISFRTDNEPFKRAMQGFTEKIVGLMKNDNLFESQGGPIILSQIENEYGVQSKLFGVPGYNYMSWAADMAVKTGTGVPWVMCKEEDAPDPIINTCNGF YCDTFAPNKPYKPTMWTEAWSGWFSEFGGPLHQRPVQDLAFSVAKFVQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPLDEYGLIRQPKYGHLKE LHR |
Full Sequence |
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Protein Sequence Length: 803 Download |
MGTHSFPNEV FFRVLLLGLL GLLCSELIQA TVTYDRKAIV INGQRRILFS GSIHYPRSTP 60 DMWEDLIQKA KDGGVDGIET YVFWNVHEPT PGNWNFEGRN DLVRFIKTIQ RAGLYAHLRI 120 GPYVCAEWNF GGFPVWLKYV PGISFRTDNE PFKRAMQGFT EKIVGLMKND NLFESQGGPI 180 ILSQIENEYG VQSKLFGVPG YNYMSWAADM AVKTGTGVPW VMCKEEDAPD PIINTCNGFY 240 CDTFAPNKPY KPTMWTEAWS GWFSEFGGPL HQRPVQDLAF SVAKFVQKGG SFVNYYMYHG 300 GTNFGRSAGG PFITTSYDYD APLDEYGLIR QPKYGHLKEL HRSIKMCERA LVSADPIVTQ 360 LGPLQQAHVY STETSDCAAF LANYDTKSAI RVLFNNMHYN LPPWSISILP DCRNVVFNTA 420 KVGVQTSQME MLPTNSEMLS WESYDEDVSS EHDGLTFTTS GLLEQINVTR DASDYLWYIT 480 NVDIGSAEKF LHGGELPTLV VRSSGHAVHI FINGQLSGRT GGPVALHGLD NGKWDLSWQT 540 WTYQVGLKGE AMNLLSPTGV SAVDWMETSL VVQKQQPLTW HKAYFNAPEG DEPLAVDMLG 600 MGKGQIWING QSIGRYWTAF ANGQCNGCSY AGSFRPPKCQ LGCGQPTQRW YHVPRSWLKP 660 TQNLLVVFEE LGGDPSRISL VKRSMTTVCA EVAEFHPTLK NWQIESYGKA EVFHSPKVHL 720 RCSQGQAISS IKFASFGTPL GTCGSYQQGT CHAATSYDII EKKCIGKQRC AVTISNSNFG 780 QDPCPNVLKR LSVEAVCVPT RA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.001 | 54 | 192 | 157 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 3.0e-17 | 32 | 334 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 9.0e-26 | 720 | 797 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-160 | 38 | 344 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 28 | 797 | 818 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF70825.1 | 0 | 14 | 801 | 10 | 844 | AF154424_1 putative beta-galactosidase [Solanum lycopersicum] |
GenBank | AAW47739.1 | 0 | 8 | 799 | 4 | 841 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 28 | 799 | 24 | 842 | beta-D-galactosidase [Pyrus pyrifolia] |
RefSeq | XP_002274449.1 | 0 | 8 | 799 | 4 | 842 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 800 | 1 | 843 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 27 | 688 | 3 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-39 | 32 | 356 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-39 | 32 | 356 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |