| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10028536 |
| Family | CE8 |
| Protein Properties | Length: 220 Molecular Weight: 24389.2 Isoelectric Point: 8.0456 |
| Chromosome | Chromosome/Scaffold: 413 Start: 1130081 End: 1130847 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 1 | 204 | 0 |
| MTFENTAGPQNHQAVALRSSSDLSVFYRCSFKGYQDTLYVHSQRQFYRDCDIYGTVDFIFGDASVVLQSCNIYVRRPMSHQKNTVTAQGRTDPNENTGIV IQSSRIMAAADLEQVQGSFETYLGRPWKQYSRTLVIKSAMDGFVDPAGWLPWNGEFALRTLYYGEYTNSGIGGRTQGRVSWPGFHVIRSATEAGKFTVGN FLNG | |||
| Full Sequence |
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| Protein Sequence Length: 220 Download |
| MTFENTAGPQ NHQAVALRSS SDLSVFYRCS FKGYQDTLYV HSQRQFYRDC DIYGTVDFIF 60 GDASVVLQSC NIYVRRPMSH QKNTVTAQGR TDPNENTGIV IQSSRIMAAA DLEQVQGSFE 120 TYLGRPWKQY SRTLVIKSAM DGFVDPAGWL PWNGEFALRT LYYGEYTNSG IGGRTQGRVS 180 WPGFHVIRSA TEAGKFTVGN FLNGDAWIPS SGVPYASGL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 2.0e-115 | 1 | 219 | 219 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 7.0e-117 | 3 | 219 | 217 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02916 | PLN02916 | 8.0e-122 | 1 | 219 | 219 | + pectinesterase family protein | ||
| PLN02713 | PLN02713 | 4.0e-127 | 1 | 219 | 219 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-140 | 1 | 205 | 205 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77092.1 | 0 | 1 | 219 | 289 | 507 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI24582.1 | 0 | 1 | 219 | 42 | 260 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002314796.1 | 0 | 1 | 219 | 313 | 531 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510940.1 | 0 | 1 | 219 | 237 | 455 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002527782.1 | 0 | 1 | 219 | 311 | 529 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 1 | 219 | 101 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 1 | 219 | 97 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-16 | 10 | 127 | 126 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-16 | 10 | 127 | 126 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-16 | 10 | 127 | 126 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG688336 | 220 | 1 | 220 | 0 |
| EG688335 | 220 | 1 | 220 | 0 |
| EC939603 | 220 | 1 | 220 | 0 |
| CB970501 | 220 | 1 | 220 | 0 |
| EL894561 | 214 | 1 | 214 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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