Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10028538 |
Family | GH35 |
Protein Properties | Length: 872 Molecular Weight: 98136.2 Isoelectric Point: 8.7889 |
Chromosome | Chromosome/Scaffold: 346 Start: 12740 End: 19405 |
Description | beta-galactosidase 16 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 53 | 357 | 0 |
LIINGHHRILFSGSIHYPRSTPEMWPSLISKAKEGGLDVIQTYVFWNLHEPKQGQFDFTGRADIVRFIKEIHAQGLYVTLRIGPFIESEWTYGGFPFWLH DIPGIEFRSDNKPFKDHMQRYVGKIVNLMKAENLYASQGGPIILSQVENEYQTIESAYREKGPSYVRWAAGMAVQLQTGVPWVMCKQDDAPDPVINTCNG YKCDQTFNGANSPNKPSMWTENWTSFLQVYGNETKRRAVQDIAFHVALFIARKGSYVNYYMYHGGTTFGRKAAAFVTTSYYDEAPIDEYGLIRQPKWGHL KELHA |
Full Sequence |
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Protein Sequence Length: 872 Download |
MAVAATVAVV IVMLTTAMNG IDAVGIDHDH HHLSTVGRMN GSDQGVSYDG RSLIINGHHR 60 ILFSGSIHYP RSTPEMWPSL ISKAKEGGLD VIQTYVFWNL HEPKQGQFDF TGRADIVRFI 120 KEIHAQGLYV TLRIGPFIES EWTYGGFPFW LHDIPGIEFR SDNKPFKDHM QRYVGKIVNL 180 MKAENLYASQ GGPIILSQVE NEYQTIESAY REKGPSYVRW AAGMAVQLQT GVPWVMCKQD 240 DAPDPVINTC NGYKCDQTFN GANSPNKPSM WTENWTSFLQ VYGNETKRRA VQDIAFHVAL 300 FIARKGSYVN YYMYHGGTTF GRKAAAFVTT SYYDEAPIDE YGLIRQPKWG HLKELHATIK 360 SCSRSLLTGV QKSFPLGQQQ DAYVFRGASG ECTAFLVNKN RTKVARVVFQ NTTYLLPRRS 420 ISILPDCKTV AFNTAKLTAQ RNTRSMILRQ QLSSTDKWQE YKETIPDFDS TAIKADKLLD 480 QLSMTKDTSD YLWYTFRFTR NSTSTKSMLN VHSHGHVLHA YVNGVNQGNT LQSGIRVYTR 540 DLRYWSAHGS HRQRVFILEK PIDLQEGVNN IALLSATVGF PDSGAYLERK VAGLRRVSTD 600 DRDFTNYAWG YQVGLLGERL QVYTDDGQNR VHWNDFGSSV HHSLTWYKTV FDAPAGRDPV 660 ALDLSSMGKG EAWVNGQSIG RYWMSYRTPR GQPSQTWYHI PRSFLEPTGN VLVLLEEETG 720 FPPGITVNTV SITKVCQYAS ETHVSVVQLS CPQNQTISKI LFASFGAPLG DCKSYSFSKC 780 HSPNSRHIVE KLHKNSWLSI AFFSFPAEYS VYYKLPVDIL FSIDLQNPNS KILSQACVGK 840 EDCTISLSKQ NFGGDPCPRI PKVLLVDARC S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-5 | 68 | 203 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-11 | 749 | 870 | 125 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 5.0e-20 | 46 | 203 | 168 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-150 | 52 | 359 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 46 | 871 | 878 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18990.1 | 0 | 46 | 871 | 28 | 817 | unnamed protein product [Vitis vinifera] |
EMBL | CBI18991.1 | 0 | 47 | 870 | 33 | 820 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284529.1 | 0 | 47 | 870 | 25 | 812 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306647.1 | 0 | 46 | 871 | 2 | 764 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520337.1 | 0 | 41 | 871 | 35 | 771 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1e-39 | 52 | 355 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-29 | 46 | 342 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-29 | 46 | 342 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 1e-29 | 46 | 342 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |