| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10028848 |
| Family | GH35 |
| Protein Properties | Length: 741 Molecular Weight: 81923.9 Isoelectric Point: 6.78 |
| Chromosome | Chromosome/Scaffold: 540 Start: 541291 End: 545403 |
| Description | beta-galactosidase 12 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 39 | 341 | 0 |
| VVNGQRRILIAGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRFDLVKFVKVVQQAGLYVNLRIGPYACAEWNFGGFPVWLKY VPGMSFRTDNEPFKAAMQKFTEKIVNMMKQEELFEPQGGPIILSQIENEYGPIEWELKAPGKAYAQWAAQMAVGLNTGVPWIACKQEDAPDPLIDTCNAY YCEKFTPNKSYKPKMWTEAWTAWFTSWGNPVLYRPAEDQAFSVLKFIQSGGSYANYYMYHGGTNFGRTAGGPFVATSYDYDAPLDEYGLTNDPKYTHLKH MHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 741 Download |
| MLSHSSLALF SLLLLLCSSS SLWVSPVTAA VTYDGKAIVV NGQRRILIAG SIHYPRSTPE 60 MWPDLIQKAK DGGLDVIQTY VFWNGHEPSP GNYYFEDRFD LVKFVKVVQQ AGLYVNLRIG 120 PYACAEWNFG GFPVWLKYVP GMSFRTDNEP FKAAMQKFTE KIVNMMKQEE LFEPQGGPII 180 LSQIENEYGP IEWELKAPGK AYAQWAAQMA VGLNTGVPWI ACKQEDAPDP LIDTCNAYYC 240 EKFTPNKSYK PKMWTEAWTA WFTSWGNPVL YRPAEDQAFS VLKFIQSGGS YANYYMYHGG 300 TNFGRTAGGP FVATSYDYDA PLDEYGLTND PKYTHLKHMH KAIKQSEKAL VSADATVTSL 360 GTNQEAHVYS SSSGCAAFLA NYDVSYSVKV NFGNGQYDLP AWSISILPDC KTEVYNTAKV 420 GSSQETEKVL ASRVHKKMTP LGGFTWDSYI DEVASGFASD TTTEDGLWEQ LYMTKDSSDY 480 LWYMQDVKIG SDEAFLTNGK DPFLNVQSAG HFLNVFINGK LIGSAYGSND NPKLTFSQSV 540 KLNVGVNKIA LLSASVGLAN VGLHFENYNV GVLGPVTLTG LNQGTVDMTK WKWSYKVGVQ 600 GEKLQLNTIA GSSSVEWVKG SMLAKKQPLT WYKSTFNAPE GNDPVALDMI SMGKGQIWIN 660 GQGIGRYWPA YTAQGNCGGC SYGGYFTEKK CLTGCGQPTQ RWYHVPRSWL KPTGNLLVVF 720 EEWGGDPTGI SMVKRTLPGK * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 0.005 | 53 | 189 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| COG1874 | LacA | 2.0e-21 | 31 | 339 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam01301 | Glyco_hydro_35 | 5.0e-154 | 37 | 343 | 322 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 27 | 737 | 712 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV32546.1 | 0 | 27 | 735 | 24 | 724 | beta-galactosidase protein 1 [Prunus persica] |
| GenBank | ABY71826.1 | 0 | 24 | 735 | 21 | 724 | beta-galactosidase [Prunus salicina] |
| DDBJ | BAE72073.1 | 0 | 9 | 735 | 8 | 722 | pear beta-galactosidase1 [Pyrus communis] |
| RefSeq | XP_002308268.1 | 0 | 24 | 736 | 21 | 725 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514108.1 | 0 | 23 | 736 | 22 | 727 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 8.96831e-44 | 37 | 339 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0008 | 624 | 668 | 504 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-39 | 31 | 349 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-39 | 31 | 349 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
