y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10029643 |
Family | GT35 |
Protein Properties | Length: 651 Molecular Weight: 73474.5 Isoelectric Point: 5.8221 |
Chromosome | Chromosome/Scaffold: 418 Start: 378591 End: 383427 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 173 | 647 | 0 |
ALSKLGHNLENVASQEPDAALGNGGLGRLASCFLDSLATLDYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIVRNDVIYPVKFYGKVDSDA DGKRHWIGGEDIKAVAHDVPIPGYKTRTTINLRLWSTKASSNDFDLDAFNDGDHTKAYKALADAEKICHVLYPGDASEEGKILRLKQQYTLCSASLQDII ARFESRSGSNINWGNFPEKVAVQMNDTHPTLCIPELMRILMDLKGLNWNDAWNITKRTVAYTNHTVLPEALEKWSLELMQKLLPRHVEIIKTIDEQLISE IVSEYGKEDKEMLDKKLKEMRVLENVDLPESFADLIVKPQETSVDVSIIKLKEPPTETESVYVSDESEDGCSEEEEEEKVVAPPPPKMVRMANLCVVGGH AVNGVAEIHSEIVKDEVFKSFYKLWPKKFQNKTNGVTPRRWIRFCNLALSNIITEWTGSEDWVLNTERLAELRKV |
Full Sequence |
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Protein Sequence Length: 651 Download |
MVITTARATS SAPHPISVSK LIDFRSASAS SKSRSKFFLT RAFNSRPFRR SFFVSNVSSE 60 HSRRFNLSAA VQQESSENRL PLSEDASCIA FSIKYNAEFV PSFSPGQLEL PKAYLATAQI 120 VRESLIKNWN ATYDLYERLN VKQAYYLSME FLQGRALLNA IGNLELTGPY AEALSKLGHN 180 LENVASQEPD AALGNGGLGR LASCFLDSLA TLDYPAWGYG LRYKYGLFKQ LITKDGQEEV 240 AENWLEMGNP WEIVRNDVIY PVKFYGKVDS DADGKRHWIG GEDIKAVAHD VPIPGYKTRT 300 TINLRLWSTK ASSNDFDLDA FNDGDHTKAY KALADAEKIC HVLYPGDASE EGKILRLKQQ 360 YTLCSASLQD IIARFESRSG SNINWGNFPE KVAVQMNDTH PTLCIPELMR ILMDLKGLNW 420 NDAWNITKRT VAYTNHTVLP EALEKWSLEL MQKLLPRHVE IIKTIDEQLI SEIVSEYGKE 480 DKEMLDKKLK EMRVLENVDL PESFADLIVK PQETSVDVSI IKLKEPPTET ESVYVSDESE 540 DGCSEEEEEE KVVAPPPPKM VRMANLCVVG GHAVNGVAEI HSEIVKDEVF KSFYKLWPKK 600 FQNKTNGVTP RRWIRFCNLA LSNIITEWTG SEDWVLNTER LAELRKVLHH * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00343 | Phosphorylase | 2.0e-37 | 559 | 646 | 88 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
TIGR02093 | P_ylase | 2.0e-38 | 559 | 646 | 88 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 6.0e-137 | 173 | 477 | 305 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
TIGR02093 | P_ylase | 1.0e-169 | 93 | 477 | 388 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 92 | 646 | 559 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA36612.1 | 0 | 3 | 646 | 1 | 651 | unnamed protein product [Solanum tuberosum] |
Swiss-Prot | P04045 | 0 | 3 | 646 | 1 | 651 | PHSL1_SOLTU RecName: Full=Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L-1; Flags: Precursor |
Swiss-Prot | P53536 | 0 | 9 | 646 | 16 | 688 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
RefSeq | XP_002305367.1 | 0 | 43 | 646 | 1 | 634 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526085.1 | 0 | 17 | 646 | 19 | 662 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 113 | 646 | 68 | 556 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 113 | 646 | 68 | 556 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1z8d_A | 0 | 114 | 496 | 53 | 433 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 1z8d_A | 2e-23 | 559 | 648 | 438 | 523 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 4el5_A | 0 | 114 | 477 | 41 | 407 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778303 | 403 | 113 | 515 | 0 |
ES816557 | 331 | 185 | 515 | 0 |
CO081471 | 290 | 125 | 414 | 0 |
CO100137 | 297 | 204 | 500 | 0 |
HO778303 | 46 | 70 | 115 | 0.0008 |
Sequence Alignments (This image is cropped. Click for full image.) |
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