y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10029644 |
Family | GT35 |
Protein Properties | Length: 297 Molecular Weight: 33430.1 Isoelectric Point: 5.2983 |
Chromosome | Chromosome/Scaffold: 418 Start: 387985 End: 390010 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 2 | 291 | 0 |
KVVSFLKEKTGYTVSPDAMFDIQVKRIHEYKRQLLNILGIVYRYKKMKESTVEERKNMYAPRVCIFGGKAFATYVQAKRIVKFITDVGATINHDPEIGDL LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCVLIGTLDGANVEIRQEVGEDNFFLFGAPADEIAGLRKERTDGKFVADPRFEEV KDYVRSGIFGGNNYDELLGSLEGNEGFGRGDYFLVGKDFPSYIECQEEVDMAYRDEKKWTRMSIMNTAGSYKFSSDRTIHEYAKDIWNIK |
Full Sequence |
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Protein Sequence Length: 297 Download |
MKVVSFLKEK TGYTVSPDAM FDIQVKRIHE YKRQLLNILG IVYRYKKMKE STVEERKNMY 60 APRVCIFGGK AFATYVQAKR IVKFITDVGA TINHDPEIGD LLKVIFVPDY NVSVAELLIP 120 ASELSQHIST AGMEASGTSN MKFAMNGCVL IGTLDGANVE IRQEVGEDNF FLFGAPADEI 180 AGLRKERTDG KFVADPRFEE VKDYVRSGIF GGNNYDELLG SLEGNEGFGR GDYFLVGKDF 240 PSYIECQEEV DMAYRDEKKW TRMSIMNTAG SYKFSSDRTI HEYAKDIWNI KAVNVE* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14986 | PRK14986 | 1.0e-100 | 2 | 293 | 297 | + glycogen phosphorylase; Provisional | ||
PRK14985 | PRK14985 | 4.0e-103 | 2 | 291 | 295 | + maltodextrin phosphorylase; Provisional | ||
TIGR02093 | P_ylase | 7.0e-143 | 2 | 290 | 294 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 1.0e-143 | 2 | 291 | 295 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 7.0e-159 | 1 | 290 | 295 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG31925.1 | 0 | 1 | 295 | 676 | 970 | alpha-1,4-glucan phosphorylase L isozyme [Cucurbita maxima] |
EMBL | CAA59464.1 | 0 | 2 | 295 | 677 | 970 | alpha-glucan phosphorylase [Spinacia oleracea] |
EMBL | CBI22291.1 | 0 | 1 | 295 | 687 | 981 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279075.1 | 0 | 1 | 295 | 663 | 957 | PREDICTED: similar to Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic [Vitis vinifera] |
RefSeq | XP_002305367.1 | 0 | 1 | 295 | 654 | 948 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2azd_B | 0 | 1 | 291 | 508 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2azd_A | 0 | 1 | 291 | 508 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2aw3_B | 0 | 1 | 291 | 508 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2aw3_A | 0 | 1 | 291 | 508 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2av6_B | 0 | 1 | 291 | 508 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE702466 | 286 | 6 | 291 | 0 |
HO797178 | 295 | 1 | 295 | 0 |
HO778303 | 295 | 1 | 295 | 0 |
JG468619 | 265 | 25 | 289 | 0 |
DT593524 | 284 | 1 | 284 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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