| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10029917 |
| Family | GH2 |
| Protein Properties | Length: 987 Molecular Weight: 111218 Isoelectric Point: 6.198 |
| Chromosome | Chromosome/Scaffold: 416 Start: 661364 End: 665291 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 40 | 761 | 0 |
| KSPWMEAVVPGSILATLVKNKVVPDPFYGLENEAILDIADSGREHYTFWFFTTFECKLSENQYLDLNFRGVNYSAEVYLNGHHMALPKGMFRRHSLDVTK ILSSEGTNMLAVLVHPPDHPGKIPPDGGQGGDHEIGKDVTTQYVEGWDWICPIRDRNTGIWDEVSISVTGPVKIIDPHLVSTFYDNYTRVYLHAAVELEN RSSSSAGCTVNIQVTTELEGGVCLVEHLQTQFLAIAAGKRIQYSFPELFFYKPNLWWPNGMGKQALYNVTITANLEGQGESDTWNQLFGFRKIESTIDSS TGGRLFKVNGQPIFIRGGNWIVSDGLLRLSRKRYQTDIKFHKDMNFNMIRCWGGGLAERPDFYHYCDVYGILVWQEFWITGDVDGRGVPVSNPDGPLDHD LFLFCARDTVKLLRNHPSLALWVGGNEQVPPPDINNALKKDLQLMPEFQYSEIKTPSEHDDSPSVSQSLSDYLDGTRVYVQGSMWDGFADGKGNFTDGPY EIQNPESFFKDDFYKYGFNPEVGSVGMPVAATIRATMPPEGWQIPLFNKQADGYVEEVPNPIWNYHKYIPYSKPSNKVHDQILLYGVPADLDDFCLKAQL VNYIQYRALLEGYSSRMWKKHTGVLIWKNQNPWTGLRGQFYDHLLDQTAGFYGCRSAAEPIHVQLNLATYFIEVVNTLSKSLSNVAIEVSVWDLDGMCPY YKVHEDLSFPLKKTTRVAEMKY | |||
| Full Sequence |
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| Protein Sequence Length: 987 Download |
| MAMEIGKKVL DSGWIAARST EVKLTGTQLT TTNPPSIEPK SPWMEAVVPG SILATLVKNK 60 VVPDPFYGLE NEAILDIADS GREHYTFWFF TTFECKLSEN QYLDLNFRGV NYSAEVYLNG 120 HHMALPKGMF RRHSLDVTKI LSSEGTNMLA VLVHPPDHPG KIPPDGGQGG DHEIGKDVTT 180 QYVEGWDWIC PIRDRNTGIW DEVSISVTGP VKIIDPHLVS TFYDNYTRVY LHAAVELENR 240 SSSSAGCTVN IQVTTELEGG VCLVEHLQTQ FLAIAAGKRI QYSFPELFFY KPNLWWPNGM 300 GKQALYNVTI TANLEGQGES DTWNQLFGFR KIESTIDSST GGRLFKVNGQ PIFIRGGNWI 360 VSDGLLRLSR KRYQTDIKFH KDMNFNMIRC WGGGLAERPD FYHYCDVYGI LVWQEFWITG 420 DVDGRGVPVS NPDGPLDHDL FLFCARDTVK LLRNHPSLAL WVGGNEQVPP PDINNALKKD 480 LQLMPEFQYS EIKTPSEHDD SPSVSQSLSD YLDGTRVYVQ GSMWDGFADG KGNFTDGPYE 540 IQNPESFFKD DFYKYGFNPE VGSVGMPVAA TIRATMPPEG WQIPLFNKQA DGYVEEVPNP 600 IWNYHKYIPY SKPSNKVHDQ ILLYGVPADL DDFCLKAQLV NYIQYRALLE GYSSRMWKKH 660 TGVLIWKNQN PWTGLRGQFY DHLLDQTAGF YGCRSAAEPI HVQLNLATYF IEVVNTLSKS 720 LSNVAIEVSV WDLDGMCPYY KVHEDLSFPL KKTTRVAEMK YPSSKNPKPA YFLLLKLYNK 780 SDYKILSRNF YWLHLPGSDY TSLQDPFRKN KIPLKLTTQT FVSGRSYEME VLVQNSSKVK 840 QPHLTSSTQK NNFIVADDDD GVDYDLNSGL QLLVPDGHGK KDGLFGTLSR MFGATKGSSS 900 LKVSSEVNGS DVGVAFFLQF SVHAVKSRYE EGEDTRILPV HYSDNYFSLV PGEEMTVKLS 960 FEVPAGVTPR LTLRGWNYPG GHTVHH* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 3.0e-8 | 195 | 466 | 299 | + beta-D-galactosidase; Reviewed | ||
| PRK10150 | PRK10150 | 7.0e-10 | 45 | 466 | 449 | + beta-D-glucuronidase; Provisional | ||
| pfam00703 | Glyco_hydro_2 | 6.0e-10 | 211 | 330 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 7.0e-19 | 100 | 466 | 385 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 6.0e-37 | 45 | 466 | 427 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO27794.1 | 0 | 4 | 984 | 3 | 975 | glycosyl hydrolase [Gossypium hirsutum] |
| EMBL | CAN82620.1 | 0 | 4 | 985 | 3 | 973 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 4 | 985 | 3 | 973 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 4 | 985 | 3 | 973 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 4 | 984 | 3 | 972 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 39 | 793 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 39 | 793 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 39 | 793 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 370 | 374 | 741 | 0 |
| GO871600 | 338 | 302 | 636 | 0 |
| ES818807 | 292 | 162 | 453 | 0 |
| DY284833 | 302 | 1 | 302 | 0 |
| ES818807 | 131 | 445 | 562 | 0.00003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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