Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10030347 |
Family | GH5 |
Protein Properties | Length: 464 Molecular Weight: 51627.8 Isoelectric Point: 6.3137 |
Chromosome | Chromosome/Scaffold: 217 Start: 900275 End: 902203 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 97 | 385 | 2.3e-32 |
GYPFLFNGFNSYWMMTVAAQTDQRHKVSDVFEQAKASGLTVCRTWAFSDGSSPQSLQMAPGVYNEQVFQGLDFVISEARRNGVRLILTLTNNYKDYGGRP QYVSWARSVGVPVTTDDDFYTHPVLKWYYKNHLTRVLTRINTFTGFSYKDDPTIMAWELMNEPRCEADHSGDTVTGWVQEMASYVKSIDSKHLLAVGMEG FYGESTPEKQRFNPGYQVGTDFITSNLIQEIDFATIHAYPDAWLIGRSRYEQTVFMQGWITSHVADSRTILRKPLVFAEFGLSKKNTGY |
Full Sequence |
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Protein Sequence Length: 464 Download |
MATFFFFFFT KTSINVTLLL LLLLICNVNT AVSYDLFPDP LNITITSFLP SPSFLPPAAS 60 SSFPPPPPPT PPSSPAVVSS VPLLFIEAKN GQFLLNGYPF LFNGFNSYWM MTVAAQTDQR 120 HKVSDVFEQA KASGLTVCRT WAFSDGSSPQ SLQMAPGVYN EQVFQGLDFV ISEARRNGVR 180 LILTLTNNYK DYGGRPQYVS WARSVGVPVT TDDDFYTHPV LKWYYKNHLT RVLTRINTFT 240 GFSYKDDPTI MAWELMNEPR CEADHSGDTV TGWVQEMASY VKSIDSKHLL AVGMEGFYGE 300 STPEKQRFNP GYQVGTDFIT SNLIQEIDFA TIHAYPDAWL IGRSRYEQTV FMQGWITSHV 360 ADSRTILRKP LVFAEFGLSK KNTGYSIIGR DVFLSAIYGS IFSSARFGGG MAGGLVWQVL 420 AEGMESYDDG YEIVLSQSPS TCFVIALQSR RMTALQHVLP KAA* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam00150 | Cellulase | 6.0e-9 | 96 | 382 | 292 | + Cellulase (glycosyl hydrolase family 5). |
COG3934 | COG3934 | 7.0e-28 | 93 | 431 | 347 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN34823.1 | 0 | 75 | 457 | 28 | 408 | endo-beta-mannanase [Daucus carota] |
EMBL | CAC08208.1 | 0 | 77 | 458 | 30 | 409 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
RefSeq | XP_002270023.1 | 0 | 85 | 458 | 32 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272344.1 | 0 | 85 | 458 | 31 | 402 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272567.1 | 0 | 85 | 458 | 32 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 85 | 455 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 91 | 444 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 91 | 444 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 91 | 444 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 91 | 444 | 18 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |