y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10030392 |
Family | GH14 |
Protein Properties | Length: 546 Molecular Weight: 61438.7 Isoelectric Point: 5.736 |
Chromosome | Chromosome/Scaffold: 217 Start: 1181849 End: 1184630 |
Description | beta-amylase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 127 | 528 | 0 |
QLNVIDMNCQLIDLDGLTNYLKILKSAGVDGVMVDCWWGIVEGDAPQVYNWSGYKELFKTVRDLKLKLQAVMSFLMNVVVMLGTNVFVPLPRWVIEIGET NSDIYFTDRGGRRNNECLTWGLDKERVLKSRTALEVYFDYMRSFRVECDEFFQDGIISEIEVGLGPCGELRYPSYPAKHGWRYPGIGEFQQKIRGHSFWG GAPENAGSYNSPPHETGFFRDGGEFDGHYGRFFLNWYSRVLIDHGDSVLALANLAFEGTKISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIATM LKEHGVTLNFTCFEMRTLDQFEGFPEAMADPEGLVWQVLNAAWDVSLPVASENALPCYDREGYNKILENAKPLHDPDCRHLSAFTYLRHSSALIERCNFE EF |
Full Sequence |
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Protein Sequence Length: 546 Download |
MPISAGHVAD GFRSCDVASA GLTPRSPFVS PSRGSLSQSN SWLRLDHNDG RLVFDGRPRK 60 SAVVISSGKI IGDHPSVDES ADEQVVEVRP KVPERDFTGT AYVPVYVMLP LTVCVTYFLG 120 LGCWAWQLNV IDMNCQLIDL DGLTNYLKIL KSAGVDGVMV DCWWGIVEGD APQVYNWSGY 180 KELFKTVRDL KLKLQAVMSF LMNVVVMLGT NVFVPLPRWV IEIGETNSDI YFTDRGGRRN 240 NECLTWGLDK ERVLKSRTAL EVYFDYMRSF RVECDEFFQD GIISEIEVGL GPCGELRYPS 300 YPAKHGWRYP GIGEFQQKIR GHSFWGGAPE NAGSYNSPPH ETGFFRDGGE FDGHYGRFFL 360 NWYSRVLIDH GDSVLALANL AFEGTKISAK LSGIHWWYKT ASHAAELTAG FYNPSNRDGY 420 APIATMLKEH GVTLNFTCFE MRTLDQFEGF PEAMADPEGL VWQVLNAAWD VSLPVASENA 480 LPCYDREGYN KILENAKPLH DPDCRHLSAF TYLRHSSALI ERCNFEEFGR FVKRMHGMQS 540 LFFPY* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 7.0e-128 | 103 | 535 | 457 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-141 | 103 | 535 | 456 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-169 | 102 | 539 | 460 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 57 | 537 | 501 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 34 | 537 | 529 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40370.1 | 0 | 16 | 537 | 20 | 540 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191958.3 | 0 | 76 | 537 | 72 | 524 | BAM2 (BETA-AMYLASE 2); beta-amylase [Arabidopsis thaliana] |
RefSeq | XP_002274612.1 | 0 | 91 | 537 | 125 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320794.1 | 0 | 96 | 537 | 1 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511858.1 | 0 | 76 | 537 | 77 | 533 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1byd_A | 0 | 102 | 539 | 11 | 445 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1byc_A | 0 | 102 | 539 | 11 | 445 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1byb_A | 0 | 102 | 539 | 11 | 445 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1bya_A | 0 | 102 | 539 | 11 | 445 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
PDB | 1wdp_A | 0 | 102 | 539 | 11 | 445 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |