| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10031008 |
| Family | GH51 |
| Protein Properties | Length: 655 Molecular Weight: 72941.9 Isoelectric Point: 8.2386 |
| Chromosome | Chromosome/Scaffold: 261 Start: 575006 End: 577935 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 205 | 649 | 0 |
| KSDRDASLVFTTYSKAVVWFDQVSLMPFDTYKGHGFRSDLTKLVADLKPAFIRFPGGCFVEGEWLRNAVRWKETVGPWENRPGHFGDVWNYWTDDGMGHY EFFQFAEDIGALPIWVFNNGIAHQDQADTSSIGPFIQEALDGIEFAVGDKKSKWGSVRARVGHPEPFDLRYVAVGNEDCWKPFYRGNYLKFFNAIRKAYP KMKIISNCDYTDRNVNKQDPADYYDFHTYKNSSELFAQRFTFDKVPRKGPKAFVSEYAVWRHDAGNGTLQAALSEAGFLMGLEKNSDYVKMASYAPLFVN TNDKMWTPDAIYFDSLSAYGTPSYWMQTFFSQSNGATLLTAELDDKSSSEMAASAIIWKDGSTGNSYLKIKVVNVGANSVNLSVGVKGLKISKMDARKTE LTFWNVTAENTLDQPLMIKPVRSELKNPSDNMNMQLASHSLTSFD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 655 Download |
| MTRLSFPQLL FLIILTCLLY TRHCHAHSRT KSAAAVAASL KVDGSGNHRT IPDTLFGVFF 60 EEINHAGAGG LWAELVSNRG FEAGGNVAPS NIAPWNVFGG DYAISVVTEP TSLFLKNLMA 120 LRVEVMCDGA SCPKGGVGIY NPGYWGMNIE QGKSYKLVFY LRSLGPVDLT VSLMGSNRAQ 180 TLASRNVSGA FTRWKKMEMV LKAGKSDRDA SLVFTTYSKA VVWFDQVSLM PFDTYKGHGF 240 RSDLTKLVAD LKPAFIRFPG GCFVEGEWLR NAVRWKETVG PWENRPGHFG DVWNYWTDDG 300 MGHYEFFQFA EDIGALPIWV FNNGIAHQDQ ADTSSIGPFI QEALDGIEFA VGDKKSKWGS 360 VRARVGHPEP FDLRYVAVGN EDCWKPFYRG NYLKFFNAIR KAYPKMKIIS NCDYTDRNVN 420 KQDPADYYDF HTYKNSSELF AQRFTFDKVP RKGPKAFVSE YAVWRHDAGN GTLQAALSEA 480 GFLMGLEKNS DYVKMASYAP LFVNTNDKMW TPDAIYFDSL SAYGTPSYWM QTFFSQSNGA 540 TLLTAELDDK SSSEMAASAI IWKDGSTGNS YLKIKVVNVG ANSVNLSVGV KGLKISKMDA 600 RKTELTFWNV TAENTLDQPL MIKPVRSELK NPSDNMNMQL ASHSLTSFDL LLAK* 660 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam06964 | Alpha-L-AF_C | 1.0e-38 | 459 | 644 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
| COG3534 | AbfA | 1.0e-40 | 239 | 644 | 480 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] |
| smart00813 | Alpha-L-AF_C | 2.0e-43 | 459 | 644 | 196 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL18931.1 | 0 | 2 | 654 | 3 | 658 | AF429985_1 arabinosidase ARA-1 [Solanum lycopersicum] |
| GenBank | ACN27961.1 | 0 | 13 | 654 | 11 | 649 | unknown [Zea mays] |
| RefSeq | NP_001065660.1 | 0 | 17 | 654 | 24 | 651 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001066062.1 | 0 | 17 | 654 | 24 | 653 | Os12g0128700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_187685.1 | 0 | 9 | 651 | 14 | 656 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 1e-18 | 239 | 622 | 48 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 1e-18 | 239 | 622 | 48 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 1e-18 | 239 | 622 | 48 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 1e-18 | 239 | 622 | 48 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 1e-18 | 239 | 622 | 48 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
