y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10031143 |
Family | AA1 |
Protein Properties | Length: 562 Molecular Weight: 62577.4 Isoelectric Point: 6.4407 |
Chromosome | Chromosome/Scaffold: 977 Start: 210820 End: 213530 |
Description | SKU5 similar 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 50 | 518 | 0 |
QQVIAVNGQFPGPLLNATTNYNVVVNVVNHLDEGLLITWPGIQMRRDSWEDGVRGTNCPIRPKRNFTYTFQVKDQIGSFFYYPSLNLQRAAGGFGPIIVN NRNVIAIPFAQPDGDIIVLIGDWYTQSHSALRTALDSGKELGMPDGVLINGKGPFKYNSSVPDGITYETFNVDPGRTYRFRVHNVGFSTSLNFRIQGHNL LLVETEGHYTVQQNYTSFDIHVGQSYSFLVTMDQNATSDYYIVASARYVNESVWQRVTGVAILHYSNSQGSAAGPLPDAPSDIYNQWSAMSQPKSIRQNT TASGARPNPQGSFHYGSINVTDTYILRSLPPVSINGKQRATLNGISFQNPDTPIRLADVHKVKGAYKLDFPNQPLNRRPVIDTSVINATYKGFIEIILQN NDTKLQSFHMDGYSFFVVGMDWGIWSESKRDSYNKWDAISRSTVEVYPGGWTAVYASLDNTGVWNLRVE |
Full Sequence |
---|
Protein Sequence Length: 562 Download |
MTVAIVLLRS SLLALICITL FSHRCFAADP TVSYEFKLSY ITASPLGVPQ QVIAVNGQFP 60 GPLLNATTNY NVVVNVVNHL DEGLLITWPG IQMRRDSWED GVRGTNCPIR PKRNFTYTFQ 120 VKDQIGSFFY YPSLNLQRAA GGFGPIIVNN RNVIAIPFAQ PDGDIIVLIG DWYTQSHSAL 180 RTALDSGKEL GMPDGVLING KGPFKYNSSV PDGITYETFN VDPGRTYRFR VHNVGFSTSL 240 NFRIQGHNLL LVETEGHYTV QQNYTSFDIH VGQSYSFLVT MDQNATSDYY IVASARYVNE 300 SVWQRVTGVA ILHYSNSQGS AAGPLPDAPS DIYNQWSAMS QPKSIRQNTT ASGARPNPQG 360 SFHYGSINVT DTYILRSLPP VSINGKQRAT LNGISFQNPD TPIRLADVHK VKGAYKLDFP 420 NQPLNRRPVI DTSVINATYK GFIEIILQNN DTKLQSFHMD GYSFFVVGMD WGIWSESKRD 480 SYNKWDAISR STVEVYPGGW TAVYASLDNT GVWNLRVENL DRWYLGQETY MKVVNPEENG 540 ETEMGPPDNV VFCGALQSLE E* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 4.0e-179 | 28 | 554 | 534 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 27 | 561 | 540 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 9 | 559 | 556 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 26 | 554 | 539 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 12 | 554 | 544 | + oxidoreductase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA23065.1 | 0 | 11 | 561 | 6 | 558 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
RefSeq | NP_194254.2 | 0 | 11 | 561 | 6 | 558 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002318885.1 | 0 | 15 | 561 | 14 | 561 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321832.1 | 0 | 10 | 561 | 9 | 561 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510943.1 | 0 | 13 | 561 | 9 | 558 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 34 | 555 | 6 | 540 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1asq_A | 0 | 34 | 555 | 6 | 540 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1asp_B | 0 | 34 | 555 | 6 | 540 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1asp_A | 0 | 34 | 555 | 6 | 540 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1aso_B | 0 | 34 | 555 | 6 | 540 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |