Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10031456 |
Family | CBM43 |
Protein Properties | Length: 530 Molecular Weight: 57286.1 Isoelectric Point: 5.5474 |
Chromosome | Chromosome/Scaffold: 863 Start: 400520 End: 402628 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 389 | 470 | 3.4e-33 |
CIATDDVDGKTLQAALDWACGPGRANCSEVQPGEACYQPNNVKNHASYAFDSYYQKEGKSSGACDFKGVGMVTTTDPSHGSC | |||
GH17 | 44 | 370 | 0 |
VGFNIGTDVSNLLSAAELVSFLQLQKITHIRLYDANPDILKALAKTKIRVTISVPNNQLLGIGSSNTTAVSWITHNVVAYYPRTLITAIAVGDEVLTTVQ SSAPLLMPAIESLYSALVASNLHTEIKISTPHATSIILDPFPPSQSFFNQSLSSNQSLTSVMVPLLQFLSRTGSPLMMNLYPYYVFMQNKGVVPLDNSLF KPLTPSKEMVDPNTLLHYTNVLDAMIDAAYFSMKNLNITDVVVLVTETGWPSKGDSSKEPYATVDNADTYNSNLIKHVLDKSGTPLHPEVTSNVYIYELF NEDLRSPPVSEANWGLFYGNSTSVYLL |
Full Sequence |
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Protein Sequence Length: 530 Download |
MSPATPPKLL FLFISSLLIL FLYPGNESSA TVVASSDQDK EPFVGFNIGT DVSNLLSAAE 60 LVSFLQLQKI THIRLYDANP DILKALAKTK IRVTISVPNN QLLGIGSSNT TAVSWITHNV 120 VAYYPRTLIT AIAVGDEVLT TVQSSAPLLM PAIESLYSAL VASNLHTEIK ISTPHATSII 180 LDPFPPSQSF FNQSLSSNQS LTSVMVPLLQ FLSRTGSPLM MNLYPYYVFM QNKGVVPLDN 240 SLFKPLTPSK EMVDPNTLLH YTNVLDAMID AAYFSMKNLN ITDVVVLVTE TGWPSKGDSS 300 KEPYATVDNA DTYNSNLIKH VLDKSGTPLH PEVTSNVYIY ELFNEDLRSP PVSEANWGLF 360 YGNSTSVYLL SVSGSGGFLA NDSTNQTYCI ATDDVDGKTL QAALDWACGP GRANCSEVQP 420 GEACYQPNNV KNHASYAFDS YYQKEGKSSG ACDFKGVGMV TTTDPSHGSC IFPGSKRISN 480 KTKTVVNSTT QSSSGAHSYS PITSIHNTTA NSAVVIVLFC ILWLLLLLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 282 | 363 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-22 | 387 | 459 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-41 | 387 | 472 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-72 | 44 | 363 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC17632.1 | 0 | 37 | 466 | 37 | 459 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
EMBL | CBI23232.1 | 0 | 17 | 497 | 17 | 493 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002316541.1 | 0 | 56 | 498 | 1 | 436 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332610.1 | 0 | 56 | 528 | 1 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518468.1 | 0 | 41 | 496 | 47 | 493 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 44 | 371 | 1 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 44 | 373 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 44 | 373 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 44 | 373 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 44 | 373 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |