| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10031650 |
| Family | GH5 |
| Protein Properties | Length: 435 Molecular Weight: 49779.4 Isoelectric Point: 6.576 |
| Chromosome | Chromosome/Scaffold: 863 Start: 1291975 End: 1294269 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 53 | 386 | 3.4e-34 |
| DGKPFYVNGWNSYWLMDHSADDQRKHKSAKMLEAGSKMGLTVCRTWAFNDGAHNALQLSPGRFEENVFRALDHVIAEARTHKVRLILSLVNNLQAYGGKD RYVKWAWEEGIGLSSSNDSFFYDPSIKKYFKHYLQTMLTRKNTLTGIEYRNDPTIFAWELMNEPRCMTDPSGDTLQDWIEEMSAFVKSIDNNHQLTVGLE GFYGPKNPKRLTVNPADWAADLGSDFIRNSKVPHIDFASVHIYPDHWVADQSFEDKLKFVTKWMLSHIEDGHYELNKPILFTEFGLSNLNKDFQPSQRDQ LYKTVYDIIYKSAKRNRAGAGALMWQLFIEDMDE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 435 Download |
| MGGNGGGLFI PILGFASCVA FIYMSLGDLW PAAYPVEPAW SFVQRNGTRF VLDGKPFYVN 60 GWNSYWLMDH SADDQRKHKS AKMLEAGSKM GLTVCRTWAF NDGAHNALQL SPGRFEENVF 120 RALDHVIAEA RTHKVRLILS LVNNLQAYGG KDRYVKWAWE EGIGLSSSND SFFYDPSIKK 180 YFKHYLQTML TRKNTLTGIE YRNDPTIFAW ELMNEPRCMT DPSGDTLQDW IEEMSAFVKS 240 IDNNHQLTVG LEGFYGPKNP KRLTVNPADW AADLGSDFIR NSKVPHIDFA SVHIYPDHWV 300 ADQSFEDKLK FVTKWMLSHI EDGHYELNKP ILFTEFGLSN LNKDFQPSQR DQLYKTVYDI 360 IYKSAKRNRA GAGALMWQLF IEDMDESNDD FGIVPWERAS TYKIITEQSC KLAKLHGTID 420 NNNQNLKELC LRKE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.004 | 200 | 295 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 6.0e-8 | 155 | 349 | 203 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 1.0e-28 | 84 | 392 | 315 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95966.1 | 0 | 5 | 434 | 7 | 435 | unknown [Populus trichocarpa] |
| GenBank | ACN78665.1 | 0 | 5 | 434 | 16 | 443 | endo-beta-mannanase [Malus x domestica] |
| RefSeq | NP_179660.2 | 0 | 5 | 417 | 6 | 417 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330687.1 | 0 | 5 | 434 | 7 | 435 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517909.1 | 0 | 7 | 434 | 6 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 41 | 415 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
