y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10031722 |
Family | AA1 |
Protein Properties | Length: 562 Molecular Weight: 62685.8 Isoelectric Point: 7.1476 |
Chromosome | Chromosome/Scaffold: 783 Start: 395177 End: 397942 |
Description | SKU5 similar 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 50 | 518 | 0 |
QQVIAVNGQFPGPLLNATTNYNVIVNVVNHLDEGLLITWPGIQMRRNSWEDGVRGTNCPIRPKRNFTHTFQVKDQIGSFFYYPSLKLQRAAGGFGPIIIN NRNVIAIPFAQPDGDIIVLIGDWYTKSHLALRMALDSGKELGMPDGVLINGKGPFKYNSSVPDGITYETFNVDPGRTYRFRVHNVGSSTSLNFRIQGHNL LLVETEGHYTVQQNYTSFDIHVGQSYSFLVTMDQNATSDYYIVASARYVNESVWQRVTGVAILHYSNSQGPATGPLPDAPSDIYNQWSAMSQPKSIRQNT TASGARPNPQGSFHYGSINVTDTYILRSLPPVSINGKQRATLNGISFQNPDTPIRLADVHKVKGAYKLDFPNQPLNRRPVIDTSVINATYKGFIEIILQN NDTKLQSFHMDGYSFFVVGMDWGIWSESKRDSYNKWDAISRSTVEVYPGGWTAVYASLDNTGVWNLRVE |
Full Sequence |
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Protein Sequence Length: 562 Download |
MTVAMVLLRS SLLALICIAL FSHRCFAADP TVSYEFKLSY ITASPLGVPQ QVIAVNGQFP 60 GPLLNATTNY NVIVNVVNHL DEGLLITWPG IQMRRNSWED GVRGTNCPIR PKRNFTHTFQ 120 VKDQIGSFFY YPSLKLQRAA GGFGPIIINN RNVIAIPFAQ PDGDIIVLIG DWYTKSHLAL 180 RMALDSGKEL GMPDGVLING KGPFKYNSSV PDGITYETFN VDPGRTYRFR VHNVGSSTSL 240 NFRIQGHNLL LVETEGHYTV QQNYTSFDIH VGQSYSFLVT MDQNATSDYY IVASARYVNE 300 SVWQRVTGVA ILHYSNSQGP ATGPLPDAPS DIYNQWSAMS QPKSIRQNTT ASGARPNPQG 360 SFHYGSINVT DTYILRSLPP VSINGKQRAT LNGISFQNPD TPIRLADVHK VKGAYKLDFP 420 NQPLNRRPVI DTSVINATYK GFIEIILQNN DTKLQSFHMD GYSFFVVGMD WGIWSESKRD 480 SYNKWDAISR STVEVYPGGW TAVYASLDNT GVWNLRVENL DRWYLGQETY MKVVNPEENG 540 ETEMGPPDNV VFCGALQRLE E* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 3.0e-179 | 2 | 554 | 554 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 5 | 561 | 562 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 2 | 554 | 558 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 10 | 554 | 555 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 12 | 554 | 544 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA23065.1 | 0 | 11 | 561 | 6 | 558 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
RefSeq | NP_194254.2 | 0 | 11 | 561 | 6 | 558 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002318885.1 | 0 | 15 | 561 | 14 | 561 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321832.1 | 0 | 5 | 561 | 1 | 561 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510943.1 | 0 | 5 | 561 | 1 | 558 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 34 | 558 | 6 | 543 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 1asq_A | 0 | 34 | 558 | 6 | 543 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 1asp_B | 0 | 34 | 558 | 6 | 543 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 1asp_A | 0 | 34 | 558 | 6 | 543 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 1aso_B | 0 | 34 | 558 | 6 | 543 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |