Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10031765 |
Family | AA7 |
Protein Properties | Length: 784 Molecular Weight: 88113.3 Isoelectric Point: 7.3776 |
Chromosome | Chromosome/Scaffold: 783 Start: 598484 End: 605132 |
Description | Per1-like family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 54 | 258 | 6.2e-29 |
DYGNIVQVQPSAVVYPASAADISLLITTLHSCNTPYRVAARGNGHCTRGQDMVSNGVVLDMKSLTPGPLGGVIRVSKDDPDHPFVDVAGGTLWIDVLNAT LKEGVAPVTWTDFLYLTVGGTLSNAGIGGQSFRFGPQISNVVEMDVVTGKGEMVTCSASNNPELYNGVLGGLGQFGVITRARLALAPAPQRVKWTRLLYS NFADF |
Full Sequence |
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Protein Sequence Length: 784 Download |
MESKPIQTQI KLLQLLIFFV TQFAAAQLLN CPLPNQLGSQ LRTDTTSLAS VSVDYGNIVQ 60 VQPSAVVYPA SAADISLLIT TLHSCNTPYR VAARGNGHCT RGQDMVSNGV VLDMKSLTPG 120 PLGGVIRVSK DDPDHPFVDV AGGTLWIDVL NATLKEGVAP VTWTDFLYLT VGGTLSNAGI 180 GGQSFRFGPQ ISNVVEMDVV TGKGEMVTCS ASNNPELYNG VLGGLGQFGV ITRARLALAP 240 APQRVKWTRL LYSNFADFTK DQESIISNHG RDQPNAVDYL EGQLLLDNGT PNTWETFFFP 300 SEAQPTIASL VAENGIVYVL ELAVYYDTTN EQVKDQQLKQ LINWLKNDHG LTFVQDVTYQ 360 EFLTRVHLPY PNTQAHPWLN LFVPKSRISQ FNSGVLRSIV LPRNISTGPV LLYPMNRNKL 420 VSANRKQRIL PPSLEFDESI LMIARCWFGF SLVLLCLLQS SEASAGDADP KYRLCVTICE 480 RTGCVGSTCF PQCNFSSDAA SYDSPRNTHE HLYQRWKLWD CQSDCRHFCM FTREAEREKL 540 GYGPMKYHGK WPFKRVYGIQ EPASVAFSAI NLAMHFHGWL SFVILLYYKL PLKQDKMTYY 600 EFTPLWHIYG LLACNSWFWS VVFHTRDVDF TDKLDYSSAV ALLGYSLIVS VLRSFNVREE 660 AARVMVAAPF LAFVTTHILF LNFYKMDYGW NMKVCVAMGV AQLLIWAIWA VTSRHPSRWK 720 LLVPVVGGSL AMLLEIYDFP PYEGYFDAHA IWHATTIPLT YIFWSFIRDD AEFRTTNLMK 780 KAK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01565 | FAD_binding_4 | 8.0e-27 | 63 | 210 | 149 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
COG5237 | PER1 | 6.0e-45 | 445 | 770 | 335 | + Predicted membrane protein [Function unknown] | ||
pfam09265 | Cytokin-bind | 2.0e-52 | 243 | 419 | 185 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
pfam04080 | Per1 | 3.0e-113 | 508 | 772 | 270 | + Per1-like. PER1 is required for GPI-phospholipase A2 activity and is involved in lipid remodelling of GPI-anchored proteins. | ||
PLN02441 | PLN02441 | 0 | 31 | 419 | 397 | + cytokinin dehydrogenase |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009690 | cytokinin metabolic process |
GO:0016491 | oxidoreductase activity |
GO:0019139 | cytokinin dehydrogenase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH19866.1 | 0 | 461 | 777 | 15 | 327 | AT1G16560 [Arabidopsis thaliana] |
EMBL | CAN65586.1 | 0 | 442 | 783 | 1 | 342 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266197.1 | 0 | 429 | 783 | 22 | 379 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002266274.1 | 0 | 442 | 783 | 1 | 342 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002310105.1 | 0 | 442 | 783 | 1 | 342 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3kjm_A | 0 | 37 | 418 | 25 | 418 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 2qpm_A | 0 | 37 | 418 | 25 | 418 | A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu |
PDB | 3s1c_A | 0 | 37 | 418 | 25 | 418 | A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu |
PDB | 3dq0_A | 0 | 37 | 418 | 25 | 418 | A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu |
PDB | 3c0p_A | 0 | 37 | 418 | 25 | 418 | A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu |