CAZyme Information

Basic Information
SpeciesLinum usitatissimum
Cazyme IDLus10032179
FamilyGH38
Protein PropertiesLength: 935 Molecular Weight: 106546 Isoelectric Point: 6.2167
ChromosomeChromosome/Scaffold: 42 Start: 1246376 End: 1249626
Descriptiongolgi alpha-mannosidase II
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH3812550
  MNDEANSHFFSIIEQITEGNMWLNDNIGVIPKNSWAIDPFGYSSTMAYLLRRMGIENMLIQRTHYELKKELALHKKLEFVWRQSWDAGETTDIFVHMMPF
  YSYDIPHTCGPEPAICCQFDFAPVPGFFYELCPWRQNPEDITPENVQERSQLLLDQFRKKSVLYRTNTLLIPLGDDFRYVSVDEAEAQFHNYQLLFDHIN
  SNPSLNAEAKFGTLDDYFQALREESDRINYSLPGEVGSSQIGGFPSLSGDFFTYA
Full Sequence
Protein Sequence     Length: 935     Download
MNDEANSHFF SIIEQITEGN MWLNDNIGVI PKNSWAIDPF GYSSTMAYLL RRMGIENMLI    60
QRTHYELKKE LALHKKLEFV WRQSWDAGET TDIFVHMMPF YSYDIPHTCG PEPAICCQFD    120
FAPVPGFFYE LCPWRQNPED ITPENVQERS QLLLDQFRKK SVLYRTNTLL IPLGDDFRYV    180
SVDEAEAQFH NYQLLFDHIN SNPSLNAEAK FGTLDDYFQA LREESDRINY SLPGEVGSSQ    240
IGGFPSLSGD FFTYADREKD YWSGYYVSRP FFKAVDRVLE RTLRATEMML ALFVGHCQRI    300
KCEKLVTGFS YKLTAARRNL ALFQHHDGVT GTAKDHVVQD YGIRMHTSLE DLQIFMSRAI    360
EVLLGMHFEK LDLNPAKFEV DQGRAENITQ PVHKALSPRE GTAQLVVLFN PTEQIREEVV    420
MVVVNRPFIT VLDSNWTCVQ SQVSPEPRHD SSNDFSGRHR LHWKASVPPM GLETYYIANG    480
FVGCEKAKPA KLKYFSSASF SCPKPYACSK LKGDSAEIHN HQQILSFDLK EGLLQKIRHS    540
NGSTYVVAEE IGMYASNGSG AYLFRPLGDA QSIIQTNGLT VITEGPLMEE LFSYPKTPYK    600
KNPVSHSTRL YNGVRYKTDI DSRRIFYTDL NGFQISRRET YDKIPLQGNY YHMPSLAFLQ    660
GSNCQRFSVH SRQSLGVASP EDGWLEIMVD RRLPTDDGRG LGQGVTDNRP MNVVFHLLLE    720
SNISSESKPV SNHLPLTPSL LSHRIGEHLN YPLHAFISKE SEELSLQTHG RSSSPLNASL    780
PCDLHIVNFK VAWPALFTRD LVGDSRFVSD ARFVLILQRW HSDASYCRKG RSQECTRFED    840
DGSLNIFEMF HGFLISKAEA TSLNLLHDDY EMLGYCEHVG DVSLDGRISI SPMEIQAYRL    900
ELLPNRDESS WNVDESGSWV LPEMKMGLWS LVGK* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00451GH38N_AMII_euk9.0e-551201202+
cd11667GH38N_Man2A21.0e-1091266266+
cd11666GH38N_Man2A13.0e-1141266266+
cd10809GH38N_AMII_GMII_SfManIII_like4.0e-1521266266+
PLN02701PLN0270101902933+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559alpha-mannosidase activity
GO:0005975carbohydrate metabolic process
GO:0006013mannose metabolic process
GO:0008270zinc ion binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAR15492.10219061915glycosyl hydrolase [Arabidopsis arenosa]
EMBLCBI35021.1019042241056unnamed protein product [Vitis vinifera]
RefSeqNP_196999.1019062391173GMII (GOLGI ALPHA-MANNOSIDASE II); alpha-mannosidase [Arabidopsis thaliana]
RefSeqXP_002276468.1019042241149PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002517418.1019062541180mannosidase alpha class 2a, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1hxk_A01767137913A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hww_A01767137913A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hty_A01767137913A Chain A, Golgi Alpha-Mannosidase Ii
PDB1ps3_A01767167943A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine
PDB3eju_A01767167943A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY9390752981914880
FL71438627322740
CB662086281463260
FN761337250232720
FG4956902391103480
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_00345.1.265.483Aquca_002_00345.1.265.483Aquca_006_00230.1Aquca_006_00257.5Aquca_006_00257.9
Aquca_006_00257.8Aquca_006_00257.7Aquca_006_00257.6Aquca_006_00257.4Aquca_006_00257.3
Aquca_006_00257.2Aquca_006_00257.1Aquca_043_00016.7Aquca_043_00016.8Aquca_043_00016.6
Aquca_043_00016.5Aquca_043_00016.4Aquca_043_00016.3Aquca_043_00016.2Aquca_043_00016.1
Aquca_043_00019.2Aquca_043_00019.1Aquca_043_00018.1Aquca_056_00071.1Aquca_002_00345.1.162.261
Aquca_002_00345.1.162.261
Arabidopsis lyrata488339488225497001484445
Arabidopsis thalianaAT5G14950.1AT5G66150.1AT5G13980.3AT5G13980.2AT5G13980.1
AT3G26720.2AT3G26720.1
Brachypodium distachyonBradi1g44550.1Bradi3g21117.1Bradi4g17327.1Bradi4g17317.1
Brassica rapaBra023496Bra006275Bra037183Bra006227Bra025225
Carica papayaevm.model.supercontig_6.275evm.model.supercontig_70.70evm.model.supercontig_2646.1evm.TU.contig_36966.1evm.model.supercontig_70.69
Capsella rubellaCarubv10000075mCarubv10002909mCarubv10027738mCarubv10016625m
Citrus clementinaCiclev10014083mCiclev10017635mCiclev10024829mCiclev10024800mCiclev10030627m
Ciclev10014156mCiclev10014160mCiclev10014123m
Citrus sinensisorange1.1g002547morange1.1g002518morange1.1g002134morange1.1g001061morange1.1g015028m
orange1.1g002366morange1.1g004057morange1.1g001910morange1.1g001850morange1.1g002764m
orange1.1g002170morange1.1g002162morange1.1g002383morange1.1g001963morange1.1g001813m
orange1.1g002938morange1.1g002542morange1.1g002064morange1.1g002056morange1.1g002046m
orange1.1g002036m
Cucumis sativusCucsa.339310.1Cucsa.043720.1Cucsa.188400.2Cucsa.188400.1
Eucalyptus grandisEucgr.J02166.1Eucgr.L01536.1Eucgr.J02456.1Eucgr.K02195.1Eucgr.J02455.3
Eucgr.J02455.2Eucgr.J02455.1Eucgr.I01600.1Eucgr.G01931.1Eucgr.J02460.1
Eucgr.J02454.1Eucgr.L01537.1Eucgr.J02457.1Eucgr.J02459.2Eucgr.J02459.1
Fragaria vescamrna28330.1-v1.0-hybridmrna14585.1-v1.0-hybridmrna01394.1-v1.0-hybrid.37.348mrna01394.1-v1.0-hybrid.37.348mrna06416.1-v1.0-hybrid.39.351
mrna06416.1-v1.0-hybrid.39.351mrna14589.1-v1.0-hybrid.71.344
Glycine maxGlyma13g04761.3Glyma13g04761.2Glyma19g01890.1Glyma13g04761.1Glyma02g05240.2
Glyma02g05240.1Glyma16g23600.1Glyma01g36980.1Glyma06g17270.1Glyma04g37790.1
Glyma19g27660.2Glyma19g27660.1Glyma16g05240.2Glyma16g05240.1
Gossypium raimondiiGorai.001G258600.2Gorai.001G258600.1Gorai.006G027500.1Gorai.003G008600.2Gorai.003G008600.1
Gorai.006G000300.3Gorai.006G000300.2Gorai.006G000300.1Gorai.012G082700.6Gorai.012G082700.9
Gorai.012G082700.8Gorai.012G082700.7Gorai.012G082700.5Gorai.012G082700.4Gorai.012G082700.3
Gorai.012G082700.2Gorai.012G082700.10Gorai.012G082700.1Gorai.003G116600.2Gorai.003G116600.1
Linum usitatissimumLus10014507Lus10015337.248.571Lus10015337.248.571Lus10039457Lus10012578
Lus10035111Lus10012577Lus10036074Lus10025960Lus10014259
Lus10041516Lus10015337.158.248Lus10015337.158.248
Malus domesticaMDP0000888429MDP0000267909MDP0000250936MDP0000139458MDP0000274501
MDP0000274500MDP0000409920MDP0000163211MDP0000657082MDP0000211018
Manihot esculentacassava4.1_000571mcassava4.1_001602mcassava4.1_000993mcassava4.1_000971mcassava4.1_000869m
cassava4.1_001123mcassava4.1_001106m
Medicago truncatulaMedtr4g071680.1Medtr6g008850.1Medtr8g075330.1Medtr7g084040.1Medtr3g098650.2
Medtr3g098650.1Medtr7g084030.1
Mimulus guttatusmgv1a000435mmgv1a000658mmgv1a000852mmgv1a000690m
Oryza sativaLOC_Os06g13650.2LOC_Os06g13650.1LOC_Os06g13650.3LOC_Os11g32260.2LOC_Os11g32260.1
LOC_Os10g05069.2LOC_Os10g05069.1LOC_Os10g05069.3
Panicum virgatumPavirv00027286mPavirv00014532mPavirv00024149mPavirv00025946mPavirv00065120m
Physcomitrella patensPp1s10_34V6.1Pp1s77_136V6.1Pp1s129_147V6.1
Phaseolus vulgarisPhvul.004G022500.1Phvul.003G264400.1Phvul.001G084400.1Phvul.002G107300.1Phvul.001G084700.1
Phvul.009G161600.1
Picea abiesMA_10434251g0010MA_879613g0010MA_4107059g0010
Populus trichocarpaPotri.017G073900.2Potri.017G073900.1Potri.001G350400.2Potri.001G350400.1Potri.014G143600.1
Potri.014G143600.2Potri.007G056300.1Potri.002G238200.2Potri.002G238200.1Potri.012G106500.2
Potri.012G106500.1
Prunus persicappa000458mppa021513mppa000707mppa000755mppa000717m
Ricinus communis29822.m00342029868.m00034130131.m00698230131.m00698130147.m014412
Setaria italicaSi005719mSi038673mSi025964mSi034056mSi025881m
Selaginella moellendorffii104910154366266756410022178241
Sorghum bicolorSb10g008770.1Sb01g026405.1Sb05g019600.1Sb01g026390.1
Thellungiella halophilaThhalv10012487mThhalv10012612mThhalv10012546mThhalv10003575mThhalv10003577m
Vitis viniferaGSVIVT01032586001GSVIVT01018752001GSVIVT01032988001GSVIVT01008340001GSVIVT01008642001
GSVIVT01032989001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)