y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10032601 |
Family | CBM43 |
Protein Properties | Length: 189 Molecular Weight: 19586.2 Isoelectric Point: 4.131 |
Chromosome | Chromosome/Scaffold: 140 Start: 960765 End: 961750 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 29 | 110 | 3e-34 |
WCVARSDASTQALQTALDYACWAGADCTPIQSNGLCFLPNTIQAHASYAFNSYFQRKSMAPGSCDFSGTANIARTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 189 Download |
MAALPSLQSA VLLIILLVRL QLGTVEATWC VARSDASTQA LQTALDYACW AGADCTPIQS 60 NGLCFLPNTI QAHASYAFNS YFQRKSMAPG SCDFSGTANI ARTDPSYGSC VYPGSLSTAG 120 GGITTPTTTP TTADIPNTWT PPGTIPTTTG LTPPISTDED DSRASIFSTA INVVAPVGCV 180 LMILLFLE* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-21 | 28 | 98 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-38 | 28 | 112 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU17645.1 | 0 | 11 | 185 | 9 | 190 | unknown [Glycine max] |
RefSeq | NP_193096.5 | 0 | 27 | 157 | 59 | 182 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 0 | 27 | 135 | 48 | 155 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002452133.1 | 9.80909e-45 | 27 | 187 | 36 | 191 | hypothetical protein SORBIDRAFT_04g020230 [Sorghum bicolor] |
RefSeq | XP_002518089.1 | 0 | 27 | 116 | 25 | 114 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-22 | 27 | 113 | 11 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |