Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10032719 |
Family | CBM43 |
Protein Properties | Length: 353 Molecular Weight: 38168.1 Isoelectric Point: 5.5943 |
Chromosome | Chromosome/Scaffold: 82 Start: 408527 End: 409777 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 266 | 346 | 1.1e-24 |
WCLPKKGVKEAELQANVDHACGQNGVNCSPIQPGGPCFEPNTETSHAVYAMNLLFHNLGGWSCDFLHTDILSTKNPSYNTC | |||
GH17 | 2 | 231 | 0 |
ITVGNEVFSSADQNVMNNLLPAIQNVHNALISASLGDKIKVSTVHSMAVMKQSEPPSAGMFDPGSSVLMKGLLEFNKATGSPFAINPYPYFAYRDDPRPE TLSFCLFQPNSGRVDGNTKIRYMNMWDAQLDAIHSALNAAGFKEVEILVAETGWPYRGDGNEVGPTVENAKAYNGNLIAHLRSMVGTPLMPRKSIDTFIF AMYDEDLKSGPGSERGFGLFNSDLTATYDV |
Full Sequence |
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Protein Sequence Length: 353 Download |
MITVGNEVFS SADQNVMNNL LPAIQNVHNA LISASLGDKI KVSTVHSMAV MKQSEPPSAG 60 MFDPGSSVLM KGLLEFNKAT GSPFAINPYP YFAYRDDPRP ETLSFCLFQP NSGRVDGNTK 120 IRYMNMWDAQ LDAIHSALNA AGFKEVEILV AETGWPYRGD GNEVGPTVEN AKAYNGNLIA 180 HLRSMVGTPL MPRKSIDTFI FAMYDEDLKS GPGSERGFGL FNSDLTATYD VGLMRTENKN 240 YSSASQMSLI PTAAPAPKVA KTKGEWCLPK KGVKEAELQA NVDHACGQNG VNCSPIQPGG 300 PCFEPNTETS HAVYAMNLLF HNLGGWSCDF LHTDILSTKN PSYNTCDYPS GS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 2 | 224 | 229 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-13 | 266 | 330 | 72 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-28 | 266 | 348 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-63 | 2 | 231 | 231 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN61862.1 | 0 | 1 | 349 | 135 | 477 | hypothetical protein [Vitis vinifera] |
EMBL | CBI32582.1 | 0 | 1 | 349 | 146 | 488 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 1 | 351 | 115 | 463 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 1 | 352 | 115 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002510373.1 | 0 | 1 | 352 | 116 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 6.99949e-42 | 2 | 233 | 89 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 3.00004e-41 | 2 | 231 | 89 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 3.00004e-41 | 2 | 231 | 89 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 8.99998e-41 | 2 | 233 | 89 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 8.99998e-41 | 2 | 233 | 89 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782823 | 359 | 1 | 351 | 0 |
HO796302 | 353 | 1 | 351 | 0 |
HO781349 | 353 | 1 | 351 | 0 |
DY293193 | 326 | 26 | 349 | 0 |
JG217900 | 206 | 1 | 206 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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